Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2116 ATGGAACAACAAAAAGAAATAGCCAAAGGACACAAAATAATCTTAATGCCATCACCATTTCAAGGCCACATAACACCATTACTCCAACTAGCAACCATTCTCCATTCAAAAGGCTTCTCAATCACCATTGTTCACACAGTTTTTAACTCTCCAAACCCTTCTTCTTACCCTCACTTCACTTTCCACCCTCTCCACGGTGCCTTGTCCGATACGGAAGCTTCAAAGGTTGATGCAGTGCATCTTACTGAGGTTATTAATGTTAGATGTGTGCAGCCTTTGAAGGAATGTTTGACTATGTTGTTGGATAAGGAAGATGATGGTGTTTGTTGTTTTGTTTCTGATGCTGCTCTTTATTTTACTCAAGCTGTTTGTGTTGAGTTTGGGATTCCTAGGATTGTTCTTAGGACTGGTGGGGCTTCTTCTTTTCTTGTTTTTGCTTCTTTTCCGATTCTCAGAGAAAAGGGTTATTTTCCTGTTCAAGAATCTCGAATGGAGGAAGCTGTGGAGGATCTTCCACCACTCAAAGTGAAAGACCTTCCTGTGTTTCAGTCGAAAGAACCTGAGGCATTCTACAAACTAGTTTGTCGCTTTATCGATGAATGCAAGAAATCCTCAGGGATTATTTGGAACACCTTTGAAGAGTTGGAATCATCTGCATTAACAAAATTGCGCCAAGATTTTTCTGTGCCAATATACCCTATAGGCCCTTTCCACAAATACTCTCTTGCTGGCTCAAATTCTACTAGCTTATTAACACCAGACAAAACCTGCATTTCTTGGTTAGACAAACAAGAACATAAAAGAGTTGTTTATGTGAGCTTTGGGAGTATTGTAGCAATAAGCGAGGCCGAGTTCTTGGAGATAGCTTGGGGGTTAGTCAACAGCAATCAACCTTTCCTGTGGGCGATTCGACCCGGGACAATCCGCGGATCAGAATGGCTTGAACCATTGCCAAGTGGGTTCTTAGAAAATTTGGGAGAAAGAGGGTATATTGTGAAATGGGCTCCTCAAGAACAAGTGCTGAAGCATCCTGCAGTTGGTGCATTTTGGACTCATAATGGTTGGAATTCAACTTTGGAGAGTGTTTGCGAAGGTGTTCCAATGATTTGTATGCCATCTTTTGGAGACCAAAAGATTAATGCCAAGTATGCAAGTGATGTTTGGAAGGTTGGAGTGCAATTAGAGGGTAAGCTTGAGAGGGGAGAGATTGAGAAGGTAATTCGAAAACTAATGGTTGGAGATGAAGGTAATGAGATTAGAGAGAATGTCATGAATTTGAAAGAAAAGGCTAATGTTTGCTTGAAAGAAGGTGGTTCTTCTTATAGTTTCCTTGATTCCTTGGTTAGTGAAATATTGTCGCTTAAATCTTCTACATCTAGAGCTCATTGA 1389 0.4068 MEQQKEIAKGHKIILMPSPFQGHITPLLQLATILHSKGFSITIVHTVFNSPNPSSYPHFTFHPLHGALSDTEASKVDAVHLTEVINVRCVQPLKECLTMLLDKEDDGVCCFVSDAALYFTQAVCVEFGIPRIVLRTGGASSFLVFASFPILREKGYFPVQESRMEEAVEDLPPLKVKDLPVFQSKEPEAFYKLVCRFIDECKKSSGIIWNTFEELESSALTKLRQDFSVPIYPIGPFHKYSLAGSNSTSLLTPDKTCISWLDKQEHKRVVYVSFGSIVAISEAEFLEIAWGLVNSNQPFLWAIRPGTIRGSEWLEPLPSGFLENLGERGYIVKWAPQEQVLKHPAVGAFWTHNGWNSTLESVCEGVPMICMPSFGDQKINAKYASDVWKVGVQLEGKLERGEIEKVIRKLMVGDEGNEIRENVMNLKEKANVCLKEGGSSYSFLDSLVSEILSLKSSTSRAH* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2116 462 Gene3D Glycogen Phosphorylase B; 248 432 - -
Mtr3g2116 462 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 7 455 - -
Mtr3g2116 462 Gene3D Glycogen Phosphorylase B; 1 247 - -
Mtr3g2116 462 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 455 - -
Mtr3g2116 462 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 426 IPR002213 GO:0008194
Mtr3g2116 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 455 - -
Mtr3g2116 462 CDD GT1_Gtf-like 12 430 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2116 Mtr-Chr3 34700258 34703938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2116 6 456 Glycosyltransferase AT3G55700 52.174 5.08e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2116 - - gmx:100783133 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2116 3 34700258 34703938 Mtr3g2116 3 34700258 34703938 ECH