Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2085 ATGAATTCACATAGTATGTTGGGCGTTGTTTTAACTGATATACTTCGGATGGTGACACCCTCACAAGAAGATTGGGAGATACGGCTTGCAATTATTAATGATTTGCGAAGCGCTGCTGAATCCGTGGAGAGTCTGAGAGGAGCAACTGTTGAACCATTTGGGTCAGTTGTATCTAATCTCTTCACGCGATGGGGTGACTTGGATATTTCAATCCAGTTATTAAATGGTTCCCATATTGGAGCTGCTGGGAGAAAACAAAAACAAACGTTGCTCGTAAATTTTCTCAAAGCTTTGAGGATGAAAGGTGGGTACATGAACTTTCAGTTCATCCCCAAGGCAAGAGTTCCCATTCTAAAATTTAAAAGTGTCCGACAAGGCATATCTTGTGATGTTTCGATCAATAACCTGCCGGGCTTGATGAAATCCAAATTCTTGCTTTGGATCAACAGGATAGATGGCCGCTTTCATGATCTGGTTGTAGTGGTGAAGGAGTGGGCCAAAGCACATAAAATCAATAACTCTAAGACTGGAAGTTTCAACTCCTTTACGCTCAGTTTACTTGTAATCTTCCACCTTCAGACATGCGCTCCTGCAATTTTACCACCACTGAAAGATATATACCCTTACAATATGGTGGATGAGCTGAGAGGTGTTAGAGCTGATGCGGAGAATCTTATTGCAGAAACCTGTGCTGCCAACATAAACAGGTTCATATCAAACAAATCCAGGCCAATTAACAGAAAATCTTTGCCTGAACTTTTTGTTGATTTCCAAAGAAAGTTTGCTCAAATTGATGAATGGGCCTCAGAGATCGGAATTTGCACTTATAGTGGACAGTGGGAACAGATAAAGAACAACATGAGATGGTTGCCCAAGACTTACGCAATATTCGTTGAGGATCCTTTTGAGCAGCCGGAAAATTCAGGAAGATCTGTCAGCGCAAAACAGCTGAAAAAGATAGCTGAAGCATTTGTAGGGACTTACAGCTTACTTATATCAAAAAATCAGAATCAAAACTCTCTTCTGACACAGTTAGCACCACCACATGTGTGGAGCCTTATTGCCAGGCCTGTCATTCCAAATTATAATGTCAGGCCTGTCATTCCAAATTATAATGTCAGGCCTGCCATTCCAAATTACAACGGAGGTTACTCTCATCCAACTCATCCACAGCCACAGGGGCAGAGGGGCGTGTTCCCACACCCAAAGTCACAGCGCCGTTTTCAAAATGGCAAGCAAGGTGCAAGCTCCAACGGTTCAACGTCAAAGCAAGGAGCAAACTCCAACGGTGCAACTTCAAATCAAGGAGCAAGCTCCAACGGGGCAACTTCAAAGCAAGGAGCAAGCTCCAATGGTGCAATTTCAACAGTACCTGCTAAAGCACTTCAAGGTCCACAGCAGCAGGCATGGAGACCAAAGGCTCCAAACCAAATAGCATAG 1440 0.4333 MNSHSMLGVVLTDILRMVTPSQEDWEIRLAIINDLRSAAESVESLRGATVEPFGSVVSNLFTRWGDLDISIQLLNGSHIGAAGRKQKQTLLVNFLKALRMKGGYMNFQFIPKARVPILKFKSVRQGISCDVSINNLPGLMKSKFLLWINRIDGRFHDLVVVVKEWAKAHKINNSKTGSFNSFTLSLLVIFHLQTCAPAILPPLKDIYPYNMVDELRGVRADAENLIAETCAANINRFISNKSRPINRKSLPELFVDFQRKFAQIDEWASEIGICTYSGQWEQIKNNMRWLPKTYAIFVEDPFEQPENSGRSVSAKQLKKIAEAFVGTYSLLISKNQNQNSLLTQLAPPHVWSLIARPVIPNYNVRPVIPNYNVRPAIPNYNGGYSHPTHPQPQGQRGVFPHPKSQRRFQNGKQGASSNGSTSKQGANSNGATSNQGASSNGATSKQGASSNGAISTVPAKALQGPQQQAWRPKAPNQIA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2085 479 MobiDBLite consensus disorder prediction 381 479 - -
Mtr3g2085 479 Gene3D - 152 327 - -
Mtr3g2085 479 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Mtr3g2085 479 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 448 - -
Mtr3g2085 479 SUPERFAMILY Nucleotidyltransferase 7 147 IPR043519 -
Mtr3g2085 479 PANTHER PROTEIN HESO1 1 448 - -
Mtr3g2085 479 CDD NT_PAP_TUTase 27 148 - -
Mtr3g2085 479 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
Mtr3g2085 479 MobiDBLite consensus disorder prediction 406 479 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2085 - - ccaj:109788017 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2085 3 34333969 34341908 Mtr3g2085 3 34333969 34341908 ECH