Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2082 ATGGCAGCAGCTGCAGTAGAAACACCTAGCAGCAGAGGAGGACAGAGATGGTCTCTAACTGGAATGACAGCACTTGTTACCGGTGGCACTCGTGGAATCGGGCATGCCATAGTGAATGATCTTGTTGCATTTGGTGCTGCTGTACACACTTGTTCAAGGACTGAATCAGAGCTCAGTAAGTGTTTACAAGAATGGCAAAGTAAGGGATTTTCGGTTACTGGGTCGGTCTGTGATGTAAGCTCTCGATCCCAAAGAGAGAGCCTTGTTCAAGAAGTGGCTTCCACTTTCAATGGCAAGCTCAACATCTTTGTAAATAACGTGGGATCAAACTTTAGAAAACCAACCATTGAGTACACTGCTGAAGAATATTCAGAGCTAATGACAATTAATTTAGACTCATCATTCCATCTGTGCCAACTTTCACATCCTCTTCTAAAAGAATCTGGAAATGGTAGCATTGTGTTCATTTCATCTGTTGCAGGTGTGGTTAGCTTAGGTACTGGATCTGTCTACGCAGCAAGTAAAGCTGCAATTAATCAGCTTACAAAAAATCTGGCCTGTGAATGGGCAATAGACAACATAAGGAGCAATTGTGTTGTACCATGGGCAACCAGAACCCCACTTGTAGAACATTTATTTCAAAATCAAAAGTTTGTGGATGATATTTTGTCTCGAACTCCTCTTAAGCGCATTGCCGAACCTGAAGAGGTCTCCTCTTTGGTGACTTTCCTTTGCTTACCTGCTGCATCATACATCACTGGACAAGTTATTTGTGTTGATGGGGGATTAACTGTGTTTGGATTTCAACCCAGCATGAGAATTACATGA 828 0.4251 MAAAAVETPSSRGGQRWSLTGMTALVTGGTRGIGHAIVNDLVAFGAAVHTCSRTESELSKCLQEWQSKGFSVTGSVCDVSSRSQRESLVQEVASTFNGKLNIFVNNVGSNFRKPTIEYTAEEYSELMTINLDSSFHLCQLSHPLLKESGNGSIVFISSVAGVVSLGTGSVYAASKAAINQLTKNLACEWAIDNIRSNCVVPWATRTPLVEHLFQNQKFVDDILSRTPLKRIAEPEEVSSLVTFLCLPAASYITGQVICVDGGLTVFGFQPSMRIT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2082 275 PANTHER TROPINONE REDUCTASE 7 272 IPR045000 GO:0016491
Mtr3g2082 275 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 158 186 IPR020904 GO:0016491
Mtr3g2082 275 Gene3D - 13 267 - -
Mtr3g2082 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 266 IPR036291 -
Mtr3g2082 275 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 7 272 - -
Mtr3g2082 275 Pfam Enoyl-(Acyl carrier protein) reductase 30 264 - -
Mtr3g2082 275 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 IPR002347 -
Mtr3g2082 275 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 IPR002347 -
Mtr3g2082 275 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 IPR002347 -
Mtr3g2082 275 PRINTS Glucose/ribitol dehydrogenase family signature 23 40 IPR002347 -
Mtr3g2082 275 PRINTS Glucose/ribitol dehydrogenase family signature 98 109 IPR002347 -
Mtr3g2082 275 PRINTS Glucose/ribitol dehydrogenase family signature 145 161 IPR002347 -
Mtr3g2082 275 PRINTS Glucose/ribitol dehydrogenase family signature 171 190 IPR002347 -
Mtr3g2082 275 PRINTS Glucose/ribitol dehydrogenase family signature 192 209 IPR002347 -
Mtr3g2082 275 PRINTS Glucose/ribitol dehydrogenase family signature 227 247 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2082 Mtr-Chr3 34274629 34277479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2082 15 270 Miscellaneous Gene Families AT2G29290 62.403 4.22e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2082 K08081 - gmx:100800947 465.692