Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2078 ATGGGACGTCTAAAGCTGCAAACGGGTATCAATTCAATAGAGGAGGAAGAACCTGAAGAATGTGATGCTGCCTGTCCTAGCAGAACAACTTTATCGTGCATGATAAATTCAGAAATTGGTGCTGTTTTGGCTGTAATGAGAAGAAATGTAAGATGGGGAAGTCGTTATATGTCAGGCGATGATCATCTGGAACACACTCTTATTCAGTCTTTTAAGGCATTGAAGAGACAAATATTTTCATGGAACCACCATCAGTGGCAAGCTATTAACCCTACCCTGTATCTACAGCCTTTTCTTGATGTGATTCGGTCTGATGAAACCGGTGCAGCAATTACAGGCGTTGCTTTGTCATCTGTTTACAAGATCTTGACACTTGATGTCATTGATCATAATACTGTCAATGTTGAGGATGCCATTCACTTGGTGGTTGATGCCGTCACTAGCTGCAGATTTGAGGTTACTGATACTTCTTCAGAAGAAGTTGTTTTAATAAAGATACTACAAGTTCTCCTAGCATGTATGAAAAGTAAAGCATCTGTTATGCTAAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAAGCTGGAAACAAAGGTGAGTCATTGCAGCAGATATCACGGTACACAATGCATGAACTTGTTAGGTGTATTTTTTCTCACCTTCAAGACGTCGACAACACAGACCATGCATTGGTTAATGGAAGCTCTAATCTGAAACAGGAGACTGGAGGAGGCCTAAATAATGAGTATGCTTTTGGAAGTAGAAAGTTGGAGAATGGCAGCATGAGTTCTGAATATGATAATCAGCCGCTACCCTCAAATTTTGCTTCTAATGCTGCAAGTGTTGTGACAGTAACTATGATGGATGAAAACACAGCGATAGCTCTTACTGGCAAGGAGAGTGCATCATATGACGTACATCTCATGACTGAACCATATGGTGTTCCTTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAATGTTATTGAGAATATGGAACTTGGTCCTAGATCGAACACTATAGCATTTGATGAAGATGTACCCCTTTTTGCTTTAACTCTAATCAATTCGGCTATAGAACTTGGAGGGCCTTCCATTCACCGTCATCCAAGGTTGCTAAGCTTGATCCAGGATGAGCTTTTTCATAATCTGATGCAATTTGGTTTGTCAATGAGTCCACTTATACTTTCAATGGTGTGTAGCATTGTTCTCAATCTTTATCACCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTACTTGTGTCATTTTAAGACTTGCGCAAAGCAGATATGGGGCTTCGTATCAGCAGCAAGAGGTAGCCATGGAAGCCCTGGTTGACTTCTGCAGACAAAAGACATTTATGGTTGATATGTATGCTAACTTTGACAGCGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGCTGTCAAGAAGTGCATTTCCTGTGAACTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAGCCAATGGATCTGCAAACTCAGAATATTCTCCTGTGAATCTTGAAGAGTATATTCCATTCTGGATGGTTAAATGTGAAAATTATGGCGATCCAAATCATTGGGTTACTTTCACTCGCCGCAGAAAGTACATAAAAAGAAGATTGATGATTGGTGCTGACCACTTCAATCGTGATCCTAAGAAAGGTTTGGAGTTTCTCCAGGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTTCTTGGAAATCATGATGAATTTTGTGTTCAGGTTCTTCATGAATTTGCCGGAACATTTGATTTCCAGGATATGAACTTAGACACAGCTCTTCGTCTATTTCTGGAGACTTTCAGACTGCCTGGAGAGTCACAAAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATACTATGAACAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAATACAGACCAGCACAATGTGCAGGTTAAAAAGAAGATGACAGAAGAGGACTTTATCAGGAATAATAGGCATATAAATGGTGGCAGTGATCTTCCTCGAGAATTCCTAACAGAGATTTATCATTCAATTTGTAAGAATGAAATCCGCACAACCCCTGAACAAGGTGTTGGGTTTCCTGAAATGACACCAAGTCGATGGATCGATTTAATGCATAAGTCAAAGAAAACTGCTCCCTTCATTGTATCTGGTTCCAAGGCCTACCTTGATCATGACATGTTTGCCATAATGTCAGGCCCAACTATTGCTGCCATCTCTGTTGTATTCGATCATGCTGAACATGAAGATGTGTACCAAACATGTATGGACGGATTCTTAGCTATTGCTAAGATTTCTGCTTGCCATCATCTTGAAGACGTTCTTGATGATCTGGTAGTGTCGCTTTGTAAGTTCACTACACTTCTAAACCCATCATTAGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTGTAACAGTGTTCACTATTGCAAATAGGTATGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGATTGCACAAGCTAGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGAGTCGGAGCTTTCTGCTGAAACTGTGCATGGCAAGCCTATTGTGAATTCTTTATCTTCAGCTCATATGCAATCTATTGGCACGCCAAGGAGATCCTCAGGATTGATGGGTAGGTTTAGTCAACTCTTGTCTCTTGACACTGAGGAGCCAAGATCACAACCTACTGAACAACAGCTTGCTGCTCATCAGCGCACTCTTCAAACAATACAGAAGTGTCACATTGACAGCATATTTACAGAGAGTAAATTTCTGCAAGCTAAATCTCTTGAACAGCTTGCAAAGGCACTTATTTGGGCCGCAGGTCGACCTCAAAAAGTTAACAGCACACCGGAGGATGAAGATACTGCTGTTTTCTGCCTAGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATAGGGATTCTTTGGCCGGGTGTATATGACCACATATCCAATATCGTTCAGTCAACTGTAATGCCCTGTGCCTTAGTAGAGAAGGCTGTTTTTGGACTCCTGCGCATTTGCCAGCGATTGCTCCCCTACAAGGAAAACATTGCTGATGAACTTTTGAGATCTTTGCAACTTGTCTTAAAGCTTGATGCGCGTGTCGCTGATGCTTACTGTGAACAGATTACTCAGGAAGTCAGCCGCCTTGTGAAGGCAAATGCTTCTCACATAAGATCCCAATTAGGATGGCGTGCAATTACATCACTACTTTCCATCACTGCTAGGCACATAGAAGCATCTGAGGCTGGGTTTGATGCACTTCTTTTCATTATGTCTGATGGTGCCCACTTGCTTCCAGCCAATTATGTTCTCTGTGTAGATACTGCAAGGCAGTTTGCTGAGTCTCGTGTTGGCCAAGCCGAGCGATCTGTGCGGGCACTAGATCTCATGACAGGGTCTGTCAATTGCTTGGCCCAGTGGACTAGCGAGGGTAAGGAAGCAATGGAAGATGAGCAAATGACTAAGTTATCTAAGGATATTGGAGACATGTGGTTGATACTAGGACAAGGTCTAAGGAAAGTGTGTTTAGACCAGAGAGAGGAGGTTAGAAATCATGCTTTATCATCTTTGCAGAAGTGCTTGATAGGAGCAGATGACATTTATCTCCCATATGGCAAGTGGTTGGACTGTTTCGATCTTGTGATCTTCACTGTGCTTGATGATCTTCTCGAGATTTCACAGGGACATTCTCAGAAGGACTACCGCAATATGGAAGGCACCCTTATCTTAGCAGTGAAGCTCTTGTCCAAAGTTTTTCTTCAATCACTCCCAGTTTTATCACAATTAACTACCTTCTGCAAGCTATGGTTAGGTGTACTGACGAGAATGGAAAAATATATGAAGGTGAAGGTTAGGGGGAAAAGAAGTGAAAAGCTTCAAGAAACAGTGCCTGACCTGCTTAAAAACTCGTTGCTTGCTATGAAAATGAGGGGTATACTGGCCCAGAGGAGTGCATTGGGTGGTGACAGTCTTTGGGAATTAACTTGGCTTCATGTGAATAACATATCACCTTCATTGCAACTTGAGGTATTCCCTGAGCAAGATTCTGAACATTCACAGTACAAACAGGGTGAATCAGTAGGAGGTTTGTTACCTGATGAAAAAGTTTCCGTCCCTTCAAGTGAAATCCCCAACCTTGAAGATGCTGGCATTGTTGGTTAA 4425 0.4165 MGRLKLQTGINSIEEEEPEECDAACPSRTTLSCMINSEIGAVLAVMRRNVRWGSRYMSGDDHLEHTLIQSFKALKRQIFSWNHHQWQAINPTLYLQPFLDVIRSDETGAAITGVALSSVYKILTLDVIDHNTVNVEDAIHLVVDAVTSCRFEVTDTSSEEVVLIKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQAGNKGESLQQISRYTMHELVRCIFSHLQDVDNTDHALVNGSSNLKQETGGGLNNEYAFGSRKLENGSMSSEYDNQPLPSNFASNAASVVTVTMMDENTAIALTGKESASYDVHLMTEPYGVPCMVEIFHFLCSLLNVIENMELGPRSNTIAFDEDVPLFALTLINSAIELGGPSIHRHPRLLSLIQDELFHNLMQFGLSMSPLILSMVCSIVLNLYHHLRTELKLQLEAFFTCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDSDITCSNVFEDLANLLSRSAFPVNCPLSAMHILALDGLIAVIQGMAERIANGSANSEYSPVNLEEYIPFWMVKCENYGDPNHWVTFTRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGSDLPREFLTEIYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSGSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSLVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPIVNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAKSLEQLAKALIWAAGRPQKVNSTPEDEDTAVFCLELLIAITLNNRDRIGILWPGVYDHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRAITSLLSITARHIEASEAGFDALLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMTGSVNCLAQWTSEGKEAMEDEQMTKLSKDIGDMWLILGQGLRKVCLDQREEVRNHALSSLQKCLIGADDIYLPYGKWLDCFDLVIFTVLDDLLEISQGHSQKDYRNMEGTLILAVKLLSKVFLQSLPVLSQLTTFCKLWLGVLTRMEKYMKVKVRGKRSEKLQETVPDLLKNSLLAMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSEHSQYKQGESVGGLLPDEKVSVPSSEIPNLEDAGIVG* 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2078 1474 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1441 - -
Mtr3g2078 1474 ProSiteProfiles SEC7 domain profile. 561 750 IPR000904 GO:0005085|GO:0032012
Mtr3g2078 1474 CDD Sec7 569 752 IPR000904 GO:0005085|GO:0032012
Mtr3g2078 1474 Gene3D - 562 644 - -
Mtr3g2078 1474 Gene3D - 645 761 IPR023394 -
Mtr3g2078 1474 SMART sec7_5 565 752 IPR000904 GO:0005085|GO:0032012
Mtr3g2078 1474 MobiDBLite consensus disorder prediction 1443 1474 - -
Mtr3g2078 1474 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 322 483 IPR032691 -
Mtr3g2078 1474 SUPERFAMILY Sec7 domain 566 753 IPR035999 GO:0005085|GO:0032012
Mtr3g2078 1474 SUPERFAMILY ARM repeat 182 1344 IPR016024 -
Mtr3g2078 1474 Pfam Sec7 domain 569 752 IPR000904 GO:0005085|GO:0032012
Mtr3g2078 1474 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2078 Mtr-Chr3 34238100 34245387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2078 K18443 - gmx:100780239 2689.06