Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2077 ATGAATCAAGACCGGATGGAATCTTGTCATGATCATCTTAAAATAACAAGATTACCTTATATACCAGAAAAAATAGGTGACTTGGTTTCATTCTCAATAAGAGTAGGCATAATTATCTGCCTTATAGCATCGATATCACTTGCTATCCATTCAACATTCGCTAAACCAGACCGATGGTTTCCATTACCGGAGCATTTACATGTTATACAGAATGTTTCAGTCATTACCATTGACACAATACCAACAAACATCTCACATATTGTATTCGGCATTGCTGGTTCATCGAAAATGTGGCATAGCCGTAGCAACTACAGCAAGCTTTGGTGGAATCCAACTGCTTGCAGAGGTTTTGTCTGGTTCGACAAGAAACCAAAGAATTTGAAGCCGGACAATATGCTAATTCCATATAAAATCTCACAGGGATGGACTAAGTTCAGGTACTTGCACTCTGCGTCCGCAGTTCGGATATCGCGGATAGTTTACGAAAGCTTTAGACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACGGTGTTTTTCCCCGAGAATTTAGTTACTGTGTTGGGAAAATATGATCACAATCAATTGTATTATATTGGTGGGAATTCTGAGAGTGTGGAACAAGATGTTATGCATTCTTATGATATGGCTTTTGGTGGCGGTGGTATTGCAATCAGTTATGCATTAGCAGCTAAACTAGCCAATATTATGGATTCTTGTCTTCATAGATACTATTATTTTTATGGTTCTGATCAAAGAATTTGGGCCTGTGTAAACGAATTAGGAGTATCTCTTACCAGAGAAAGAGGATTCCATCAGCTCGACATTAGAGGGAATCCATATGGTCTTTTAGCTGCGCACCCTCTGGCACCGCTTGTGTCACTCCATCACCTTGATCAATTGAACCCGGTGTTTCCGGACCAAAGTCAAATCTCTTCATTAAAAAAACTCATCAGTGCATACGAAATTGACCCTGCAAGGATAGTGCAGCAAAGCGTTTGCTATGATCATAGGCGAAGATGGTCAATATCTATTTCTTGGGGCTACACAATACAAATCTATACATCGTTGTTGATAACAGCGGATTTGCAGATGCCATTTCAGACATTTAAAACATGGCGAAGTTCAAGTGATGGTCCTTTCACGTTTAATACTCGATGGATGAACCCTGACGTATGCCAGCAGCCATCTATATTTTTCCTGGATCAGGTTAGCGAGGCGAGGACTGGAAGTGTCACTACCTATAAGAGATATGCTGACAAGGATGGAAAGAAGTGCAAGAGAGCAGATGGAGAAGTGCAGAGAATTAAAGTTTCTGCCTTGAAGCTGGATCCAGAATATTGGAAGAATGTACCACGTAGGCAATGCTGCAACTTCATGGATGGTGGAAGCATAAAGGATGGAAGTGTGCATATCAGAATAAGGAAGTGCAGGCCTCAAGAAACAATTACTATTTAG 1470 0.4048 MNQDRMESCHDHLKITRLPYIPEKIGDLVSFSIRVGIIICLIASISLAIHSTFAKPDRWFPLPEHLHVIQNVSVITIDTIPTNISHIVFGIAGSSKMWHSRSNYSKLWWNPTACRGFVWFDKKPKNLKPDNMLIPYKISQGWTKFRYLHSASAVRISRIVYESFRLGLPNVRWFVMGDDDTVFFPENLVTVLGKYDHNQLYYIGGNSESVEQDVMHSYDMAFGGGGIAISYALAAKLANIMDSCLHRYYYFYGSDQRIWACVNELGVSLTRERGFHQLDIRGNPYGLLAAHPLAPLVSLHHLDQLNPVFPDQSQISSLKKLISAYEIDPARIVQQSVCYDHRRRWSISISWGYTIQIYTSLLITADLQMPFQTFKTWRSSSDGPFTFNTRWMNPDVCQQPSIFFLDQVSEARTGSVTTYKRYADKDGKKCKRADGEVQRIKVSALKLDPEYWKNVPRRQCCNFMDGGSIKDGSVHIRIRKCRPQETITI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2077 489 Pfam Protein of unknown function, DUF604 212 461 IPR006740 -
Mtr3g2077 489 PANTHER FRINGE-RELATED 10 487 - -
Mtr3g2077 489 Gene3D - 78 341 - -
Mtr3g2077 489 PANTHER BNAA05G27650D PROTEIN 10 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2077 Mtr-Chr3 34232575 34236640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2077 10 487 Glycosyltransferase AT3G11420 53.441 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2077 - - gmx:100802549 756.518