Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2075 ATGGCGAACGCAGAGAGCAGTAGCAGAAGCTCAAGATGGTCCCTCAAGGGATTCACTGCTCTCGTCACCGGCGGAACACGTGGAATCGGACATGCTATCGTGGAAGAACTCGCTGAGTTTGGTGCCACAGTCTACACTTGTTCTAGGAACCAAGAGGAGCTGAATAAACGCTTAAATGAGTGGAAAGAGAAAGGTTTTTCTGTTTATGGATCTGTTTGTGATGCATCTTCTTCTTCTCAAAGAGAGGAGCTTATTCAAAATGTGGCTTCTTCTTTCAATGGCAAACTCAACATATTTGTGAACAATGCTGGAACAAATGTGAGGAAGCCAACAATCGAGTATACGGCCGAAGATTATTCGAAAGTGATGACTACTAACTTGGATTCTGCATATCATCTATGCCAACTGACATATCCTCTTCTTAAAGAATCTGGAAATGGAAGCATTGTTTTCATTTCCTCTGTTGGGTCTCTGACAAGCGTAGGTACTGGAAGCATCTATGCAGCGAGTAAAGCTGCAATCAATCAGCTGACAAAAAGTCTTGCTTGTGAATGGGCGAAAGACAACATAAGGAGCAACTGTGTCGCACCCTGGTATACAAAAACACCACTTGTGGAACATCTAATTGCTAACGAAGAGTTTGTGAATCAAGTACTATCTCGAACACCAATAAAGCGTATAGCAGAAACACATGAAGTGTCTTCCTTGGTGACTTTCCTTTGCCTGCCAGCTGCTTCCTACATCACTGGCCAGATTGTTTCTGTTGATGGAGGATTTACTGTGAATGGGTTTCAACCCAGCATGAGGATTACCTAA 816 0.4326 MANAESSSRSSRWSLKGFTALVTGGTRGIGHAIVEELAEFGATVYTCSRNQEELNKRLNEWKEKGFSVYGSVCDASSSSQREELIQNVASSFNGKLNIFVNNAGTNVRKPTIEYTAEDYSKVMTTNLDSAYHLCQLTYPLLKESGNGSIVFISSVGSLTSVGTGSIYAASKAAINQLTKSLACEWAKDNIRSNCVAPWYTKTPLVEHLIANEEFVNQVLSRTPIKRIAETHEVSSLVTFLCLPAASYITGQIVSVDGGFTVNGFQPSMRIT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2075 271 Gene3D - 2 264 - -
Mtr3g2075 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Mtr3g2075 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Mtr3g2075 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Mtr3g2075 271 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Mtr3g2075 271 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Mtr3g2075 271 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Mtr3g2075 271 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Mtr3g2075 271 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Mtr3g2075 271 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Mtr3g2075 271 PANTHER TROPINONE REDUCTASE 4 267 IPR045000 GO:0016491
Mtr3g2075 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 262 IPR036291 -
Mtr3g2075 271 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Mtr3g2075 271 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Mtr3g2075 271 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2075 Mtr-Chr3 34202940 34205944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2075 12 266 Miscellaneous Gene Families AT2G29290 59.533 5.71e-117 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2075 K08081 - gmx:100819646 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1470 7 29483601 29497649 Mtr3g2075 3 34202940 34205944 ECH
Mtr3g2075 3 34202940 34205944 Mtr3g2075 3 34202940 34205944 ECH