Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2073 ATGGCAAAGCAAGAGAACAGTAGCAGAAGCAGAAGCTCAAGATGGTCCCTCAAGGGATTCACAGCTCTTGTCACCGGCGGAACTCGTGGGATCGGTCATGCTATCGTAGAGGAACTTGCTGAGTTTGGTGCTATAGTGTACACTTGTTCTAGGAATGAAGAAGAATTGAATAAATGCTTAAATGAGTGGAAGGAGAAAGGTTTTTCTGTTTATGGATCAGTTTGTGATGTGACTTCTTCTTCTCAAAGAGAAGAGCTTGTTAGAAAAGTGGCTTCTGCTTTCAACGGCAAGCTCAACATTCTTGTAAACAATGTTGGAACAAATGTGAGGAAACCAACAATTGAGTATACAACAGAAGATTATTCAAAATTGATGACTATTAACTTGGATTCTGCATACCATCTATGCCAACTGACATATCCTCTTCTTAAAGAATCTGGAAATGGAAGCATTGTATTCAATTCCTCTGTTGCATCTCTGACACACGTAGGTTCTGGAACGATATACGCAGCATGTAAAGCTGCAATCAATCAGCTGAACAAAGGTCTTGCTTGTGAATGGGCAAAAGACAATATAAGGATCAATTGCGTCGCGCCTTGGTATACAAAAACACCGCTTAATGATTATTTATATGCTAACAAAGAGTTTGTGAATGAAGTACTATCTCGAACACCGATAAAACGGATAGCAGAAACACATGAAGTGTCTTCCTTGGTGGCTTTCCTTTGTCTGCCAGCTGCTTCTTACATCACTGGACAAGTTATTTCTGTTGATGGAGGATTTACTGCGAATGGATTTCAACCCAGCATGATCATAAGAAGTGATTAA 828 0.3998 MAKQENSSRSRSSRWSLKGFTALVTGGTRGIGHAIVEELAEFGAIVYTCSRNEEELNKCLNEWKEKGFSVYGSVCDVTSSSQREELVRKVASAFNGKLNILVNNVGTNVRKPTIEYTTEDYSKLMTINLDSAYHLCQLTYPLLKESGNGSIVFNSSVASLTHVGSGTIYAACKAAINQLNKGLACEWAKDNIRINCVAPWYTKTPLNDYLYANKEFVNEVLSRTPIKRIAETHEVSSLVAFLCLPAASYITGQVISVDGGFTANGFQPSMIIRSD* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2073 275 PRINTS Glucose/ribitol dehydrogenase family signature 21 38 IPR002347 -
Mtr3g2073 275 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Mtr3g2073 275 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Mtr3g2073 275 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Mtr3g2073 275 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Mtr3g2073 275 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Mtr3g2073 275 Pfam Enoyl-(Acyl carrier protein) reductase 28 262 - -
Mtr3g2073 275 PANTHER TROPINONE REDUCTASE 7 269 IPR045000 GO:0016491
Mtr3g2073 275 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Mtr3g2073 275 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Mtr3g2073 275 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Mtr3g2073 275 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Mtr3g2073 275 Gene3D - 2 266 - -
Mtr3g2073 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 264 IPR036291 -
Mtr3g2073 275 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 7 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2073 Mtr-Chr3 34184648 34188475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2073 1 266 Miscellaneous Gene Families AT2G29150 59.398 7.86e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2073 K08081 - gmx:100819646 420.624