Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2069 ATGGAGCAAAATCTTGAACTGGTACCAATTACATCACAAAAACACGACCCAGCATGGAAACATTGTCAATTGTTTAAGAATGGTGAAAAAGTGCAACTTAAATGCAATTATTGTCTCAAGTTTTTCAAAGGTGGTGGGATTCATAGGTTTAAGGAACACCTTGCTTGTCAGAAAGGCAATGCTTCAATGTGTAGTAGTGTTCCTGCTGATGTAAGGCAACATATGCAGCAGAGTTTGGATGGTGTTGTTGTGAAGAAGAGGAAGAGACAGAAGATCGAGGAGGAGATTATGAATGTTAATCCTTTAGCTACTGTTTTGAATGGTGGTAATAATCAGATGGATGTTAATCATCATGGGGTGCATGTGCAGCCTATTGGAGTTCATGATCCAATGGAACAGAATCCGGTCTCGTGTCAGATGTTTCATTCGCCCGGTGAAGGAATGAGTAGAAATGTAGAGAGAAGGAAGAAGATTAGAGCTACTAAGAATCAGAATCAGAATCCGGCTGCGGTGGTTTATAATACGAACTATGAGCCTGAACCTGTTGTTGCCCCCATGGAGAAAAATACATTGTTTCCTACAAAGGTGGACCATCAAATTCATATGGCGATAGGAAGGTTTTTGTATGATATCGGTGCGCCTTTTGATGCTGTGAACTCGATATATTTTGAGCAGATGGTTGAAGCAATTGCTTCTGGGGGATCAGGTTTTCAACGTCCATCGCATCATGAACTTCGGGGATGGGTTCTGAAAAATTCTGTGGAAGATGTGAAGAATGATGTAGATAGATGTAAGATGACGTGGGGGAGGACTGGCAGTTCGATTTTGGTTGATCAATGGACTACAGAAGCTGGTAGGATACTGATAAGTTTTTTGGCTTACTGTCCTGAAGGTGTAGTGTTTTTGAAATCGTTGGATGCGACTGAGAGATTGATTTCAGAAGATTTTTTATACGGGTTGATGAAAGAAGTAGTAGAAGAAGTTGGAGTTGGGCAAGTTGTGCAAGTGATTACATCAGCTGAGAAATGGTATGCTGATGCTGGGAGAATGCTGACTGAGACTTACCCTAGCCTTTATTGGAGCCCTTCTGCGGCTCATTGCATTGATTTGATACTTGAAGATTTTGGAAATATTGAGTGGATTAGTACAGTTATTGAACAGGCTAAATCTATAACAAGATTTGTCTACAATTACAGTGCAATTTTGAATATGGTTAAAAGGTATACTTTGGGGAATGATATTGTGGATCCCTCTTTCTCTCGCTTCACGACAGACTTTACCACGTTGAAACGAATGGTTGTTCTTAAACACAATTTACAGGCCATGGTTACTTCTCAGGAATGGATGGATTGTCCATATTCAAAGGAAGCAGCAGGTTTGGAGATGTTAGATATACTAAGCAATCAAACATTTTGGTCCTCGTGTGAAATGATTGTTCGCCTGACACATCCTCTTTTGAGAGTTCTGAGAACAGCTTCAAGTGAGATGAGACCTGCAATGGGATACACTTATGAAGGAATTTACCGGGCAAAAGAAGCGATTAAGAAAGCACTTATCAAAAGGGAGGATTATATGGTGTTCTGGAATATTATACATCAAAGATGGGATAGTCTTTGGCATCATCCTCTTCATGCTGCAGGCTTCTATCTTAATCCGAAATTCTTTTATAGCATTCAAGGGGATGTACCCAATGAGATTCGCTCAGGGATGCTTGACTGCATAGAGAGATTGGTACCTGATACAAGAGTCCAAGATAAAATTAGCAAAGAATTAAACTTGTATAAATCTGCTGCAGGAGATTTTGGGAGAAAGATGGCAATCAGAGCTAGAGATAATCTGCTTCCTTCTGAATGGTGGTCAACATATGGAGGAGGCTGCCCTAACTTGTCCCGCTTAGCAATTCGCATTCTTAGCCAAACATCAAGTGTGATGTTCTGCAAGAGAAACCAAATTCCTTTTGAACAGATAATCAATACAAGGAATTATATAGAGCGCCAACATTTTACTGATCTCGTCTTTGTTCACTACAATTTACGGTTGAGACAAATGTTTATGAATAAGGAGCAAGAATCTAGCGATCCTCTGTCATTCGACAACATTTGTAACGTTGAAGACTGGATCGGGCCAAGGGATTTGTACTTCGGAGAGTATGGTAACTCGGATTGGATGGCACTTGATTCATCTTCCATTAACACAATGCCTTTAAGGTCTTTAAACGATGAACCTGAAGAAATGTGTGAAGGGTTTGACGATGATGAGATTTTCATTAGTCTGAAAGATGATGAGGATGTGAATTCCGGAGACAAGTTCGAAAACCATTAG 2322 0.4018 MEQNLELVPITSQKHDPAWKHCQLFKNGEKVQLKCNYCLKFFKGGGIHRFKEHLACQKGNASMCSSVPADVRQHMQQSLDGVVVKKRKRQKIEEEIMNVNPLATVLNGGNNQMDVNHHGVHVQPIGVHDPMEQNPVSCQMFHSPGEGMSRNVERRKKIRATKNQNQNPAAVVYNTNYEPEPVVAPMEKNTLFPTKVDHQIHMAIGRFLYDIGAPFDAVNSIYFEQMVEAIASGGSGFQRPSHHELRGWVLKNSVEDVKNDVDRCKMTWGRTGSSILVDQWTTEAGRILISFLAYCPEGVVFLKSLDATERLISEDFLYGLMKEVVEEVGVGQVVQVITSAEKWYADAGRMLTETYPSLYWSPSAAHCIDLILEDFGNIEWISTVIEQAKSITRFVYNYSAILNMVKRYTLGNDIVDPSFSRFTTDFTTLKRMVVLKHNLQAMVTSQEWMDCPYSKEAAGLEMLDILSNQTFWSSCEMIVRLTHPLLRVLRTASSEMRPAMGYTYEGIYRAKEAIKKALIKREDYMVFWNIIHQRWDSLWHHPLHAAGFYLNPKFFYSIQGDVPNEIRSGMLDCIERLVPDTRVQDKISKELNLYKSAAGDFGRKMAIRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMFCKRNQIPFEQIINTRNYIERQHFTDLVFVHYNLRLRQMFMNKEQESSDPLSFDNICNVEDWIGPRDLYFGEYGNSDWMALDSSSINTMPLRSLNDEPEEMCEGFDDDEIFISLKDDEDVNSGDKFENH* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2069 773 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 10 746 - -
Mtr3g2069 773 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Mtr3g2069 773 Pfam Protein of unknown function (DUF 659) 240 391 IPR007021 -
Mtr3g2069 773 SUPERFAMILY Ribonuclease H-like 299 649 IPR012337 -
Mtr3g2069 773 Pfam hAT family C-terminal dimerisation region 590 678 IPR008906 GO:0046983
Mtr3g2069 773 PANTHER OSJNBA0013A04.12 PROTEIN 10 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2069 Mtr-Chr3 34141239 34144754 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2069 - - aprc:113850304 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2069 3 34141239 34144754 Mtr3g2069 3 34141239 34144754 ECH