Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2068 ATGACTACTTCCTTGATTTTCTTCTGCTTTCTTCTCTCCGTCTCTGTCACAGCCACAGGTGTTGTTAAGGATGGAAACGGGACACAACTCATACTCGTAAACAACTGCAAGGAAAGTGTATGGCCAGGAATTCTCAGCAATGAAGGACACCCTTCAATCAAAGATGGCGGATTTCACCTCCCAAGCGGCGAAGAACTTGTTCTCCAACTCCCTAACCACTGGGCAGGAAGAATCTGGGGAAGACAAGGCTGTTTCTTCCACGAAACAACCGGAAAAGGCACATGTCAAACCGGAGACTGCGGAGGCCAATTGAAATGCAAGGGAATTGGTGGTGTTCCTCCAGCTACACTTGTTGAAATGACACTTGGAACCTCACATTCACCTCTACATTACTATGATGTTAGTTTAGTTGACGGTTTTAACCTTCCAATGTCGATGAAACCTATTGGTGGGGGTGTTGGTTGTGGCATTGCTACTTGTCAAGCTGATTTGAATGGTTGTTGTCCATCTCAACTTGTTGTGAAGCATAATGGGAAAGTTGTGGGGTGTAAAAGTGCTTGTTTGGCTACAAAATCAGATAAGTATTGTTGCACTGGTGAATTTGCTGATCCGAAAATTTGCAAGCCAACTATGTTTGCTCGTGTTTTTAAGAGTGTTTGTCCTCATGCTTATAGCTATGCTTATGATGATGCAACCGGGCTTATGTCTTGTTTGGCAAATCGTTATGCCATTACATTTTGCCCTCCATGA 750 0.4387 MTTSLIFFCFLLSVSVTATGVVKDGNGTQLILVNNCKESVWPGILSNEGHPSIKDGGFHLPSGEELVLQLPNHWAGRIWGRQGCFFHETTGKGTCQTGDCGGQLKCKGIGGVPPATLVEMTLGTSHSPLHYYDVSLVDGFNLPMSMKPIGGGVGCGIATCQADLNGCCPSQLVVKHNGKVVGCKSACLATKSDKYCCTGEFADPKICKPTMFARVFKSVCPHAYSYAYDDATGLMSCLANRYAITFCPP* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2068 249 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Mtr3g2068 249 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mtr3g2068 249 PRINTS Pathogenesis-related protein signature 130 146 IPR001938 -
Mtr3g2068 249 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Mtr3g2068 249 SMART tha2 30 248 IPR001938 -
Mtr3g2068 249 PANTHER OS03G0233200 PROTEIN 3 249 IPR001938 -
Mtr3g2068 249 CDD TLP-PA 29 247 - -
Mtr3g2068 249 Pfam Thaumatin family 34 248 IPR001938 -
Mtr3g2068 249 ProSiteProfiles Thaumatin family profile. 30 249 IPR001938 -
Mtr3g2068 249 Gene3D Thaumatin 29 248 IPR037176 -
Mtr3g2068 249 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 3 249 - -
Mtr3g2068 249 SUPERFAMILY Osmotin, thaumatin-like protein 29 249 IPR037176 -
Mtr3g2068 249 ProSitePatterns Thaumatin family signature. 91 106 IPR017949 -
Mtr3g2068 249 PIRSF PR5 1 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2068 Mtr-Chr3 34137583 34138819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2068 10 248 Receptor kinase-like Gene Family AT5G38280 38.618 2.49e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2068 - - gmx:100809093 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2068 3 34137583 34138819 Mtr3g2068 3 34137583 34138819 ECH