Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2037 ATGAATGTTAGCAGAAAGAGAAATTACCATTCAATTTCATCTCCATCACCACCAAAAACCTCAACACACTCTCCAATACCAATCCCACCCTTAGGTAAAACAAAAACCCTCTTCGAAATAATCTCCACAAACCCATCTTTAACCGTTGAAAAATCCCTCGAAGATTCTCAAATCAATTTAACCCCACAAGACGTTGAAAATGTTCTCAAACTTTCTTACCGGTTCCCGGCTCAATCAGTTAAATTCTTCCGTTGGGCCGGTCACCGTATTAATCATAACCACACTCCATATGCTTGGAATTTGGTTATTGATATTTTAGGTAAAAATTGTTTATTTGATGCAATGTGGGACGCTGTTAAATCAATGCGTCGTGAGGGTTTGTTGTCGCGATCCACTTTCGCGTCAATTTTCGCGAGTTATGTTAATGCTGGTAGATTAGCTGATGCTATAATGACTTTTGAGGTTATGGATGGGTATGGTGTTGTAAGGGATGTTGTTTCGTTGAATTCGTTGTTGAGTGCTGTTTGTGGGAGTGGGAGGAGTGTTGAAGCGTGTGATTATTTGCAGATTGCAAAGAAATTGGTTAGACCGGATTCGGATACTTATGCTATTTTGATGGAGGGTTTGGAGAGTGATGGGAATGTTGTTGGTGCTAAGGAGACTTTTGCGGAGATGGTTATTGAAATTGGTTGGGATCCGGGGAATGTGGCTGCGTATGATTCGTTTTTGTGTTGTTTGATTAAGGGGAGTGATGGGATTCATGAGGCGGTTAAGTTTTTTGATTCGTTGAGAGATAGGAGATGTTATCCGGGGATTAGGTTTTTTAGGGTTGCGTTGGATGAGTGTTCTAGGTTTCATGATATACGGAGGGCAGAGTTTTTTTGGGAGGTTATGATGGGGAAGACTAAGTTGCAGCCGATGACGGCTATGTATAATTCGATGATTGCTTTGTATTGTTATCATGGGGATATTGATGCTGCTACGAAAATGCTTGATGGGATGGTTTGTAAAGGGGCGTTCCCGGATTCGCTTACTTATAATTTGTTGTTTAGGTTTTTGGTTAAAGGGAGGAAATTAAGGGACGCGACGAGGGTGTTTGTGGAAATGGTGAAAAACGAGTGTGTGCCGGATCAGCTTAATTGTGATGCGGCTGTTAGGGTTTATTTGGATAATGGGGATCCTGTTATGGCTATTAAAGTTTGGAAGTGTTTGGTTGAGAATTACCGTGAGGATTTAGAGGGTACTGCAAACTTGCTGGTTGTAGGGCTTCGAGATAATGATAGGGTTCCCGAAGCGGTTAAGTATGCTGAGCATATTATTGGAAGAGGAATCAAGTTGACTTCTTCGACATTGTCGAAGTTGAGACAGAGCCTTGTCAAAGACAGAAAAGAATTCGTGTATGACGAACTTATAGCAAAGTGGAAAGCGGCCTATTAG 1437 0.4148 MNVSRKRNYHSISSPSPPKTSTHSPIPIPPLGKTKTLFEIISTNPSLTVEKSLEDSQINLTPQDVENVLKLSYRFPAQSVKFFRWAGHRINHNHTPYAWNLVIDILGKNCLFDAMWDAVKSMRREGLLSRSTFASIFASYVNAGRLADAIMTFEVMDGYGVVRDVVSLNSLLSAVCGSGRSVEACDYLQIAKKLVRPDSDTYAILMEGLESDGNVVGAKETFAEMVIEIGWDPGNVAAYDSFLCCLIKGSDGIHEAVKFFDSLRDRRCYPGIRFFRVALDECSRFHDIRRAEFFWEVMMGKTKLQPMTAMYNSMIALYCYHGDIDAATKMLDGMVCKGAFPDSLTYNLLFRFLVKGRKLRDATRVFVEMVKNECVPDQLNCDAAVRVYLDNGDPVMAIKVWKCLVENYREDLEGTANLLVVGLRDNDRVPEAVKYAEHIIGRGIKLTSSTLSKLRQSLVKDRKEFVYDELIAKWKAAY* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2037 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 342 376 IPR002885 -
Mtr3g2037 478 MobiDBLite consensus disorder prediction 1 19 - -
Mtr3g2037 478 PANTHER OS02G0711100 PROTEIN 15 476 - -
Mtr3g2037 478 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 15 476 - -
Mtr3g2037 478 TIGRFAM PPR: pentatricopeptide repeat domain 345 377 IPR002885 -
Mtr3g2037 478 TIGRFAM PPR: pentatricopeptide repeat domain 310 342 IPR002885 -
Mtr3g2037 478 TIGRFAM PPR: pentatricopeptide repeat domain 97 127 IPR002885 -
Mtr3g2037 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
Mtr3g2037 478 Gene3D Tetratricopeptide repeat domain 74 231 IPR011990 GO:0005515
Mtr3g2037 478 Gene3D Tetratricopeptide repeat domain 232 420 IPR011990 GO:0005515
Mtr3g2037 478 Pfam PPR repeat family 308 353 IPR002885 -
Mtr3g2037 478 MobiDBLite consensus disorder prediction 1 29 - -
Mtr3g2037 478 Pfam PPR repeat 98 127 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2037 Mtr-Chr3 33752853 33755459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2037 145 473 Glycosyltransferase AT1G05670 26.686 4.42e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2037 - - gmx:100784707 628.632