Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1998 ATGGTTATGCATTTTCTTCTTGTGCTTCTTTTTGCAGTATCTACTGTTGTGGCTGATGAAGAACCATTTATTGGGGTGAACATTGGCACCGATCTCTCAGACATGCCTCACCCTACCCAAGTAGTAGCACTGCTTAAAGCTCAGCAAATTCGACATATTCGATTGTACAATGCAGACCAAGCTATGCTAACAGCACTATCAAAATCAGGAATTCAAGTTGTCATCTCTGTCCCTAATGAAGAGCTTCTAGCAATTGGTCAATCAAATTCCACAGCTTCAAATTGGGTTTCTCGCAATGTGTTGGCATACTATCCAGCCACAAATATCACGGCAATTTGTGTTGGTTCTGAGGTTTTAACCACACTCCCAAATGTAGCAAAAGTCTTAGTCAACGCTCTTAACTACATTCATTCAGCCCTTGTTGCATCGAATCTTGATCGTCAGATCAAAGTTTCGACGCCGCTTCCTTCTACCATGATACTTGATTCATTTCCACCTTCACAAGCCTTCTTTAACACATCAATGAATCAAGTCTTGAAACCAATGCTTGATTTCTTGCAATCCACTCAATCTTATCTCATGCTTAATGTTTACCCTTACCATGACTACATGGAATCAAATGGTGTGATCCCTTTGGATTATGCACTCTTCAAACCAATTCCACCTAACAAAGAATCCATTGATTCCAACACACTTCTCCATTACTCAAATGTGTTTGATGCTGTTGTCGATGCAGCGTATTTTGCAATGTCATATATGAATTACACCAACATTCCCGTGGTGGTGACCGAAACTGGTTGGCCTTCAAAAGGTGATTCTAACGAACCTGGTGCAACACTTGCCAATGCAAATACTTACAACAGCAATTTGATCAAGCATGTGTTGAATAAGACCGGAACTCCAAAGCTCCCCGGGATTGGTGTTAGTACTTATATCTACGAGCTCTACAACGAGGACAAACAGCCAGGGGCATTGTCAGAGAAAAATTGGGGACTATTTGATTCAAATGGTGTGCCTGTTTATGTTTTGCAATTGACAGGTTCAGGTGCAGTTTTGGCAAATGATACAAAAGGTGAAACTTATTGCGTTGCTAAAGATGGTGCTGATCCAAAGATGTTGCAGGCTGGAATTGATTGGGCTTGTGGACCAGGAAAAGTGGATTGTTCTCCATTGTTGCAGGGAAAACCATGCTATGATCCTGATAATGTTGTTGCTCATGCTAATTATGCTTTTGATGCTTATTATCATAAGATGGGAAAGTCTACTGAATCATGTAACTTCAATGACATGGCTACTATCTCTACTTCAGATCCAAGTCACGGTTCTTGTATATTTCCAGGAAGCCTTGGCTTCTCTAACGCCCCTGCTCCTGCACCATCACATTTTTCTGGCTGCACTCTTCTTAGATGTGAATTGAGAATTAGAAGCCTTCTAATTGTGATAGGACTTCTAATATCGGAAGTGGTTTTGCTATAA 1476 0.4085 MVMHFLLVLLFAVSTVVADEEPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHIRLYNADQAMLTALSKSGIQVVISVPNEELLAIGQSNSTASNWVSRNVLAYYPATNITAICVGSEVLTTLPNVAKVLVNALNYIHSALVASNLDRQIKVSTPLPSTMILDSFPPSQAFFNTSMNQVLKPMLDFLQSTQSYLMLNVYPYHDYMESNGVIPLDYALFKPIPPNKESIDSNTLLHYSNVFDAVVDAAYFAMSYMNYTNIPVVVTETGWPSKGDSNEPGATLANANTYNSNLIKHVLNKTGTPKLPGIGVSTYIYELYNEDKQPGALSEKNWGLFDSNGVPVYVLQLTGSGAVLANDTKGETYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGKPCYDPDNVVAHANYAFDAYYHKMGKSTESCNFNDMATISTSDPSHGSCIFPGSLGFSNAPAPAPSHFSGCTLLRCELRIRSLLIVIGLLISEVVLL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1998 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 7 385 - -
Mtr3g1998 491 Gene3D - 355 445 - -
Mtr3g1998 491 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Mtr3g1998 491 Pfam Glycosyl hydrolases family 17 24 344 IPR000490 GO:0004553|GO:0005975
Mtr3g1998 491 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Mtr3g1998 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 385 IPR044965 GO:0004553|GO:0005975
Mtr3g1998 491 Gene3D Glycosidases 23 349 - -
Mtr3g1998 491 Pfam X8 domain 361 432 IPR012946 -
Mtr3g1998 491 SMART X8_cls 360 445 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1998 Mtr-Chr3 33097043 33101221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1998 18 450 Glycoside Hydrolase AT1G66250 72.748 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1998 K19891 - gmx:100799965 794.653