Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1981 ATGGCGCTAACCTTCATCTTCCTCTTCTTCATCCCTCACCTCCTATCTTCCATCTCAGCACAATCCACCTCCATGGAATCGGTCCCCGATCTTCAGAGCACCATGTACACCGACGTTGACGGATTTCCTTGCGTTCGGCTGCTAAGTCTCTCTGGAACCATCGGTTGTTCAAATCCTGGGCGAGATAAGGTTGTAGCTCCAATTGTGAGGTTCGAAAATGTTGATGATGTGACAGAGTTATCTTCTATATTGGTCTCAATGGATCAGTTTCCAACTCTCTTCAACAGATTATCAGCTGACCCAAGCTTTGCAAGCAAAGTTGGTGGTGTGCTAGTTGAATCAGTTACTGATTCACAGAAGAAATTAAATGGATTCTCTCCAGATCAAAAGTTTCCGCTGGCTGAATTTGCTCCTTACCACAATATCAGCTATGAATGGAACCCAATTGGTTCTGGTATTATGTGGAAATCCTACGGTTTTCCTGTGTTTTTACTCACAGAAAGTGGCACGAAGACTCTTCAAGAGTTTGTATTAAAAGGTGAGGACAAAAAGAAAGCTTATACATCTAATGTGGCTGAGTTTGATCTGGTGATGCAGACAATGAAATCTGGGACACATGATTCAGAGTCTTGTTTAAATGAAGGAACTTGCCTCCCTTTAGGTGGATACAGTGTTTGGTCGGCTCTTCCTCCAATCAACAATTCATCCTCAAAACCGTCTAAGCCCATTATATTGACAGTAGCCTCTATGGATTCTGCTTCCTTTTTCCGAGACAGAAGTCTTGGTGCAGATTCACCTATTTCTGGTTTAATTGCATTACTGGCAGCAGCCGATGCACTTTCTCATTTGGATGGTATTGGTGACCTTAGTAAGCAGCTTGTTTTTGTAGTTTTCACTGGAGAAGCATGGGGCTATCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACGAGCACTCAGATGCTGTTCAAGGCCTTAATCACTCATTAATTGAAAAGGTCCTTGAAATTGGTTCTGTTGGAAAGGGACTCAGTCAAGGGGCTAAAAACTTTTTTGCTCATGCAGAAAGGGATTCTTCTGCCACAAATCAGATCATGGTTGCCCTGAAACATGCACAAGAATCACTGCTATCTGAAGACATACGGATCACATCTGCAAGTGCCTCAAATCCTGGGATACCTCCGTCATCTTTAATGACCTTTTGGAACAAGAATCCCGGAATCTCTGGTGTCGTGTTAGAAGATTTTGACTCTTCCTTTGTTAACGAGTTCTACCATAGTTATCTTGATGATTTATCAAATGTGAACTCATCGGCTGTAGTTGCTGCTGCTTCTCTTGTTGCCCGAACCCTTTACATACTTGCTAGTGAAACTAATGATGTACAAAATTCAACTTTGGCTGCTATAAATGTAAATGTCTCACTTGTTGAACAACTTGTGGGTTGCCTGTTGGGCTGTGATCCTGGTCTTTCTTGTGAGTTGGTGAAGAAATATATTTCACCCGCTTCAACCTGTGCGAGCAATTATGTTGGTGTTATCTTAGATGAACCTTCTTCCACACCTAATCCAGGATACATTAATGACGTTCCTAGGTTCATCTGGAATTTTCTAGCCGATATAACTTCTATCTCAAAGGAGAATAGTAGCTCAGGTTGTCAACAGGGTTGCAGTGGTAGCGATGAAGTTTGCATTAAAGCAGAGACTGATGGAAAGGGAGTTTGTGTTCTCTCTACAACTAGGTACGTTCCAGCATATTCAACACGGTTATCATTTGAATCAGGAGTATGGAGTGTTTTGCCCCCAAATTCCTCAGACAAAATGGGGGTCGTAGATCCAGTCTGGACAGAAAGTAACTGGAATACAGTAGGCATTCGGATCTACACAGTCCAAATTGCTGCTTATGACCGGGTTGTTCTGTTTGGGGGAATGACTCTTACACTCTTGGCATACCTTGGAATAGCAGTTACAAGAACTTTCGTTGCCAAAGCAACAAAGAGGGATTGA 2001 0.4243 MALTFIFLFFIPHLLSSISAQSTSMESVPDLQSTMYTDVDGFPCVRLLSLSGTIGCSNPGRDKVVAPIVRFENVDDVTELSSILVSMDQFPTLFNRLSADPSFASKVGGVLVESVTDSQKKLNGFSPDQKFPLAEFAPYHNISYEWNPIGSGIMWKSYGFPVFLLTESGTKTLQEFVLKGEDKKKAYTSNVAEFDLVMQTMKSGTHDSESCLNEGTCLPLGGYSVWSALPPINNSSSKPSKPIILTVASMDSASFFRDRSLGADSPISGLIALLAAADALSHLDGIGDLSKQLVFVVFTGEAWGYLGSRRFLVELDEHSDAVQGLNHSLIEKVLEIGSVGKGLSQGAKNFFAHAERDSSATNQIMVALKHAQESLLSEDIRITSASASNPGIPPSSLMTFWNKNPGISGVVLEDFDSSFVNEFYHSYLDDLSNVNSSAVVAAASLVARTLYILASETNDVQNSTLAAINVNVSLVEQLVGCLLGCDPGLSCELVKKYISPASTCASNYVGVILDEPSSTPNPGYINDVPRFIWNFLADITSISKENSSSGCQQGCSGSDEVCIKAETDGKGVCVLSTTRYVPAYSTRLSFESGVWSVLPPNSSDKMGVVDPVWTESNWNTVGIRIYTVQIAAYDRVVLFGGMTLTLLAYLGIAVTRTFVAKATKRD* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1981 666 Pfam Nicastrin small lobe 43 200 IPR041084 -
Mtr3g1981 666 SUPERFAMILY Zn-dependent exopeptidases 214 452 - -
Mtr3g1981 666 PANTHER NICASTRIN 14 665 IPR008710 GO:0016021|GO:0016485
Mtr3g1981 666 Pfam Nicastrin 242 451 - -
Mtr3g1981 666 Gene3D Zn peptidases 173 470 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1981 K06171 - gmx:100818367 1056.59