Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1971 ATGGAATCTGAATTCCCATTAGAATTACAATCCGAAACCTTCAAGATTCTAAGTTCCAACGATGACAAAGCCATGGAAACTCTCTTCTCTCACCTTTACCCTAACCCTACTCAACACCAAAACCATGAACAACAACAAAACCGATCAAAATCACTCACATTCCTTCAATGTTGCAAACACCACCACCCTGATCTCCTCATGATCAAACTCTTTTTCCTTCTAACCTCATCCCCAGAAATCCCTACTCGCACAAACGCTGCACGCGCTCTTGTTTTTGTCAAACCCTCTCATCTTTGGCCTAAACTCCGTCCTCAGGCCCAAGCCCGTCTCCAGGCCCATTTCCTTAAATTCATAACCGAAGAAAAATCAGTCCACGTTCTTAGACTTGCGTCACTTGTCTTAGCCGAAACCATTTCAGTTATTTATCAAAACCATCAACACTGGCAAGAAATTCTCGAATTTCTCTTCTCCTCGGTTAATTCAACCGAAGAGAAGCTTCGAGAATTTTCCTTTTTAGTCTTCGCCTCACTGTCAAATGACTGTTGTTTAATCCTCTCCAAATCTCTACACGACCGTGTTAAAGTACTTCACTCGTCGTTCATTGGTTCACTTGCTGATTCACGAAACCCTAACGTTCAAGTTGCATCATTTGGTGCAGTGGTGAGCCTGATTCGTTTGTTTTCAGATCCATCACTTTTTCACGAACTACTTCGAGCCATGATGGTCGGTGTATTTTCACTCTTGCAAGGATATGAAAGAAGCTACTTCAAAAGCGCTTTTGCAGAGTTGGTTAAGCTTGTGTCTGCTGAACCTCTTCTTGTGAAGCCTTACATGAGTGATATGGTCTTAGATGCACTTCAGATCGCGGAGAATAGCGGTGTTAGCGATGAAACTCATCGTTTGGCTTTTGAATTGGTGCTTGCGATGACTGAGTTGAAGGAATGTGAACAGATGCTGATGTCTTTGCCTCATGAGACTTTGGTTAGGTTATTTATCATTCCGATGAAGTCGTTGGTTTTGTCTGTTAAAGAGGACGGTAATGGTGCTGGTTTTGGTGATTGTGGATCGGAAGAAGAAAAAAGAAAAGGTGTAGATGGTGAGAATGAAAAGGTTGATGATGTGTATGAATTTGGAATCAAGTGTTTGAAGAAGCTTTGTGTTGCATTTGGAGGGGACAAAGTTTTGGCTGTTGCTCATGAACTGTTGACTAAATATTACTTGGATTCAGCTGACTGGAAAATGCGACATGCAGGAATTACATTGCTCACTGTGATTTCCAAAGAGTTTTCTGATGAAATGGTATTGATGGATAACTTTCTAGGGGAAATGGTAACCAAAACTTTGAAGTTATTCCAAGACTCTCATGTTCAAGTTCGGTTGGCTGCTTTTACTTTGATGGAGATGCCTATAAACTTTGTCCAAGCGGCTCAACTTCTTTATCATCATAGGTTTATGCATGCCTTCTCCATTGCACTTGGCAGTGATGAGGACAATAAAGTGAAGCACATTTTTAATGTCTTTAAATTTGAAAATGGTGTGTTGCTTTTCAAGGAACAAGCTGCCTCAGCAATGTTGTTCTTTCTAAAGAACACTCTTCCTGATAGCTTAGCATTATACGAGTATGCGGATATTTTAATGAAGAAATTGTTATCAATGATTCAGGATAAAAGAAGTGCTAAGCAAAGAAGGATTGCTTTGTTAACTTTTAACATAGTTGTACAACGTTGTAATCAAGTAGCTCACAAGTATTTTGCAATTTATCTTCCAAACTTAGTGGAAGCATGCAGTGACAAAGATTCTGAAATCAAAGAGGAAGCAGCAAGGGGAATTCGAATTTGTGCTGAGTTTGGGACACCAACTTTTAAGCCTTTTATCAATATGATATTGTCAGAACTCAATATTTTAATCAAAGATCCAAACCGATCAGAGAATGCAAAAGCATGTGATATTGCAGTTTCTGCTATAGGAAGAATTTGTGAATTCCATCGCGATTGCATTGATGGCTCTATGTTTATCCCTGCTTGGTTAAGTTTCTTGCCACTTAAAGAAGATTTGGTTGAAGCAAAAATTATGCATGAACAGCTCTGTTCAATGGTTGCAAGATTAGATAGAGATCTTTTAGGAGCTGGTAATCAAAATCTTGTTAAGATTATTGCAGTGTTACTTGAAGTAATTGAGAAGGGTGACAAATTGGCTACAGCACAAACAATCAACCAGATGAATAATTTGCTGAGACAGTTTGGGAAGACCATACCTCCTAGTGCATTTGAGAAAATTTTAATGTCTTTGAGTGCTCAACAACGGGAATTATTATTGCCGTTTGTATCATCATTCTAA 2337 0.3915 MESEFPLELQSETFKILSSNDDKAMETLFSHLYPNPTQHQNHEQQQNRSKSLTFLQCCKHHHPDLLMIKLFFLLTSSPEIPTRTNAARALVFVKPSHLWPKLRPQAQARLQAHFLKFITEEKSVHVLRLASLVLAETISVIYQNHQHWQEILEFLFSSVNSTEEKLREFSFLVFASLSNDCCLILSKSLHDRVKVLHSSFIGSLADSRNPNVQVASFGAVVSLIRLFSDPSLFHELLRAMMVGVFSLLQGYERSYFKSAFAELVKLVSAEPLLVKPYMSDMVLDALQIAENSGVSDETHRLAFELVLAMTELKECEQMLMSLPHETLVRLFIIPMKSLVLSVKEDGNGAGFGDCGSEEEKRKGVDGENEKVDDVYEFGIKCLKKLCVAFGGDKVLAVAHELLTKYYLDSADWKMRHAGITLLTVISKEFSDEMVLMDNFLGEMVTKTLKLFQDSHVQVRLAAFTLMEMPINFVQAAQLLYHHRFMHAFSIALGSDEDNKVKHIFNVFKFENGVLLFKEQAASAMLFFLKNTLPDSLALYEYADILMKKLLSMIQDKRSAKQRRIALLTFNIVVQRCNQVAHKYFAIYLPNLVEACSDKDSEIKEEAARGIRICAEFGTPTFKPFINMILSELNILIKDPNRSENAKACDIAVSAIGRICEFHRDCIDGSMFIPAWLSFLPLKEDLVEAKIMHEQLCSMVARLDRDLLGAGNQNLVKIIAVLLEVIEKGDKLATAQTINQMNNLLRQFGKTIPPSAFEKILMSLSAQQRELLLPFVSSF* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1971 778 PANTHER BETA-3, PUTATIVE-RELATED 15 774 - -
Mtr3g1971 778 PANTHER IMPORTIN BETA 15 774 IPR040122 GO:0006606
Mtr3g1971 778 SUPERFAMILY ARM repeat 44 701 IPR016024 -
Mtr3g1971 778 Gene3D - 558 776 IPR011989 -
Mtr3g1971 778 Gene3D - 28 557 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1971 Mtr-Chr3 32782861 32788230 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1971 K20222 - gmx:102669706 877.47