Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1967 ATGATGCGTATGTGCTTGACAGGCTTGGCCTTTGGAATGGGTGTATTGACAATTTTTGCTTCACCTCCCCTTTACCGGACATTTTGCCAAGCAACTAGCTATGATGGAACTGTTACCAGGCGTGAGCGTGTTGAAGAAAAGATTGCAAGGCATGATAGCAATCAAACAGTCACTTCAAGGGAAATCGTGGTACAGTTCAATGCTGATATATCGGATGGGATGCCATGGAAGTTTCTTCCAACGCAGAGAGAGGTTAGGGTGAAGCCCGGAGAAAGTGCCCTTGCATTTTATACCGTAGAAAACCAAAGTTCTACTCCAATAACCGGTGTTTCTACATATAATGTCACTCCTATGAAGGTATTCTTTTATATTGATCCGGAAATCGAGGATGATCCTAAAATGAATGGTATAAATAACATAATATTATCATATACTTTCTTCAAGGACAAAGTTTCTGAAGAATAA 465 0.4022 MMRMCLTGLAFGMGVLTIFASPPLYRTFCQATSYDGTVTRRERVEEKIARHDSNQTVTSREIVVQFNADISDGMPWKFLPTQREVRVKPGESALAFYTVENQSSTPITGVSTYNVTPMKVFFYIDPEIEDDPKMNGINNIILSYTFFKDKVSEE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1967 154 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED 118 154 - -
Mtr3g1967 154 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED 2 119 - -
Mtr3g1967 154 PANTHER BNAA08G27140D PROTEIN 118 154 - -
Mtr3g1967 154 PANTHER BNAA08G27140D PROTEIN 2 119 - -
Mtr3g1967 154 PIRSF COX11 118 154 IPR007533 GO:0005507
Mtr3g1967 154 PIRSF COX11 1 120 IPR007533 GO:0005507
Mtr3g1967 154 Pfam Cytochrome c oxidase assembly protein CtaG/Cox11 23 119 IPR007533 GO:0005507
Mtr3g1967 154 Pfam Cytochrome c oxidase assembly protein CtaG/Cox11 118 148 IPR007533 GO:0005507
Mtr3g1967 154 Gene3D Ctag/Cox11 51 119 IPR023471 -
Mtr3g1967 154 Gene3D Ctag/Cox11 120 154 IPR023471 -
Mtr3g1967 154 SUPERFAMILY Ctag/Cox11 53 149 IPR023471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1967 Mtr-Chr3 32724859 32728228 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1967 K02258 - gmx:100812885 233.032