Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1966 ATGGAGAGAGCAAACACTAAATCTACTTTGAAGTTTGTCAAGAACGGTTCACAATCTTCATCTCAATGGAGTAGTACTGATTCTAAAGGAATGACAAAAGATGTACTCAAAGAAAGGTTTTATGACAAGAATAAGGGTTCAAGAAAATCTCCTACAAAAGAAAATACAAAACCACAAGAATTCAAACTCCACACACAAGAAAGAGCTGTCAAACGTGCAATGTTCAACTATGAAGTGACAACAAAATTATATCTCATGGAGTTGCGAAAGAGACAAGAGGAGAAGTTGATGAAGATGATTGAAGAGGAAGAGATACGTTTGCTTAGGAAAGAAATGGTTCCACGAGCTCAATTGATGCCTTACTTTGATAAGCCATTCTTCCCACAAAGATCAAACAGAACAGTTCCAAGAGAATCATGCATTCACATGATGAGTAGCAAGTGCTGGAGCTGCACCTCTGGCAATGGATTTTACAACATGCACCAATGTGGTCATCAAGCTCTTAACAACCCCATTAAATAG 522 0.3793 MERANTKSTLKFVKNGSQSSSQWSSTDSKGMTKDVLKERFYDKNKGSRKSPTKENTKPQEFKLHTQERAVKRAMFNYEVTTKLYLMELRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSNRTVPRESCIHMMSSKCWSCTSGNGFYNMHQCGHQALNNPIK* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1966 173 PANTHER TARGETING PROTEIN FOR XKLP2 1 165 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Mtr3g1966 173 Pfam Targeting protein for Xklp2 (TPX2) domain 61 133 IPR027329 -
Mtr3g1966 173 MobiDBLite consensus disorder prediction 31 60 - -
Mtr3g1966 173 MobiDBLite consensus disorder prediction 1 60 - -
Mtr3g1966 173 MobiDBLite consensus disorder prediction 8 30 - -
Mtr3g1966 173 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1966 Mtr-Chr3 32712676 32715309 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1966 - - mtr:MTR_3g064800 332.413