Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1602 ATGCCACCAATATCTGGAAAACTATTCACCGTTAGTTTGATAAGTTTTTGGTATGCATCAAACATTGGTGTATTACTATTAAACAAGTACCTTTTAAGCAACTATGGTTTCAAGTACCCAATATTCTTAACACTATGTCACATGATGGCATGTTCAATGTTAAGTTACATTGCAATATCATGGATGAAGGTGGTGCCATTGCAAACAGTGAGATCAAGGGTACAATTTGTGAAGATATCATCACTTGGACTTATATTTTGTTTGTCTGTGGTTGGAGGGAATATTTCTCTAAGATATCTTCCTGTGTCTTTTAATCAAGCTATTGGTGCTACGACACCGTTTTTTACGGCGGTTTTTGCTTATCTTATGACCCTTAAGAGGGAGGGTTGGCTTACTTATATGGCTCTTGTACCTGTTGTTACTGGTGTTATGATTGCTAGTGGGGGAGAACCAAGTTTTCATCTATTTGGATTTATAATGTGCATCAGTGCTACAGCAGCCAGAGCACTCAAAACAGTACTTCAAGGAGTCTTACTATCTTCTGAAGGAGAACAACTGAATTCTATGAACCTTCTTATGTACATGGCACCAGTGGCTGTTGCATTCCTACTTCCTGCTTCAATTATAATGGAGGAAGATGTGCTTGGAATTACCATTCAACTTGCTAGAGAAGATTCAACTATTGTGTGGTTACTTATTTTCAACTCCACACTAGCATATTTTGTCAACTTGACCAATTTTTTAGTCACAAAGCACACTAGTGCTTTAACACTTCAAGTACTAGGAAATGCAAAAGGAGCTGTGGCAGTTGTAATCTCTATTTTGATATTTAGAAATCCGGTATCAGTAACTGGAATGTTAGGATATTCTCTTACAGTCATTGGAGTTATCCTATATGGTGAAGCCAAGAAGCGAAGTAAACGAGATACATGA 933 0.3741 MPPISGKLFTVSLISFWYASNIGVLLLNKYLLSNYGFKYPIFLTLCHMMACSMLSYIAISWMKVVPLQTVRSRVQFVKISSLGLIFCLSVVGGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTLKREGWLTYMALVPVVTGVMIASGGEPSFHLFGFIMCISATAARALKTVLQGVLLSSEGEQLNSMNLLMYMAPVAVAFLLPASIIMEEDVLGITIQLAREDSTIVWLLIFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMLGYSLTVIGVILYGEAKKRSKRDT* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1602 310 PANTHER - 7 306 - -
Mtr3g1602 310 PANTHER SOLUTE CARRIER FAMILY 35 7 306 - -
Mtr3g1602 310 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Mtr3g1602 310 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1602 Mtr-Chr3 27979083 27982407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1602 5 307 Organic Solute Cotransporters AT3G11320 82.178 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1602 - - gmx:100803533 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1602 3 27979083 27982407 Mtr3g1602 3 27979083 27982407 ECH
Mtr3g1602 3 27979083 27982407 Mtr3g2123 3 34819307 34826787 ECH
Mtr3g1602 3 27979083 27982407 Mtr5g2777 5 36214273 36218214 ECH
Mtr4g0493 4 6243491 6246574 Mtr3g1602 3 27979083 27982407 ECH