Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1571 ATGGCTTCTCCCAATCAACCACCGCCTTCTCCAACCCCTTTCGATATGCACACTTTCTTCAATCCCCCAAACCCTAACCCTAACCCTAACCCTAACATTTCTTCCCAATTCCCTTCCTCCGCTCCTTCACCGCCACCACCTTCTTCATCCTCCTCTTATCCTTTCCCTCACAACAACAATAACTACCCTTACGATCACCACCATCACCAGCTTCAGCATCAGCATCAACAACAGCACCATCAACAAAACCAGACCAATTTTCCAATTCAACACCGTTCAATTTCATTCCCTACACCCCCTCTTCAACCACCTCAACAACCTCAACCAATCCCACCTCCTTCAAATCCTAACGCCGGTGCCCGTCTCATGGCTCTCCTCAGCACCCCTCCAATCCAACAACAACAACCACCACCGCCACAATCACAGCCCATCTCTTCTGGCGCTGTTAATCCGGCGATAACTGCTGCCAATGCTGCAGCGGCAGCGTTGATTAGGCTGCCGAGTAGTAAGGTGCCGAAAGGAAGGCATTTGATTGGTGATCATGTTGTGTATGATGTGGATGTTAGGTTGCCTGGTGAAGTGCAGCCTCAGCTTGAGGTTGCACCGATTACGAAATATGGATCGGATCCTAATCCGGTTTTGGGTCGACAGATTGCTGTGAATAAGTCTTATATTTGTTATGGGTTGAAACAGGGGAATATCAGGGTGCTTAATATTCATACTGCTGTTAGATCTTTGCTTAGAGGGCACACTCAGAGGGTCACAGACTTGGCATTCTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGCACAGATGGCCGTGTCTTTGTGTGGAAAATTTCTGAAGGCCCGGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTGTTCAAATAGTCGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAAATTTTGATAGTTGGTATGGGAAAAAATGTTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTTGTAGCAGAAGATCCTCCAAAATGTCCTCTTGACAAGCTCATTGATGGGGTTCAACTTGTTGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCAGCATCACAGGATGGCACGATAAAGATATGGGAAGATCGGAAGACACACCCACTTGCTGTTTTCAGACCTCATGATGGGCATCCTGTTTTTTCTGCTACATTTTTTACTGCTCCACACCAGCCTAATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAGCTCTGGGTCTCAGCTAGTGAAGAAGGTTGGCTGCTTCCAAGCGATACTGAAACATGGAAATGCACTCAGACTTTGGAGTTGAAGAGTTCAGCTAAGCTGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCACTTGGAATATGGTCCTAATCCCGAATCAACTCACATGGATTATATGGCCGAGTTTACTGTGACCATGCCCATTCTTAGTTTTACTGGAACAAGTGATATTTTGCCTCATGGGGAACATATTGTTCAGGTTTATTGTGTTCAAACTCTGGCTATTCAGCAGTATGCTTTGGATTTAGCACAATGCTTGCCTCCACCATTAGAAAATGCGGGACTAGATAAGTCTGATTCCAGTGTTTCACGAGATGCAATTACTGCTGAAGGATTTGCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGATGTCTTTACCCAGTTCTGCTCCCAAAACAACGATGCAAGCAAGTAGCACTGAGAGTGGTCTCGTGTCAAGATACCCTTTAAGCTCAGGTCATACTGAAGCACCTATTTCTAGACAAATCAGCAGTTCAAATGTTGAAGCTAAAACTGTTACACTGGCTCCTTCTAGTAGTGATGCTGATATTGTTTGTGTTCCTTCTATACCTCCTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGGGGACCAAGCTGTTAATGATTATTCAGTTGACAGACAAATGGATACAATTCACAGAAACTTGTCCGACCAATTTAATAGCGATACAAAGAATGATGACAATAAAATCAAACAGGATGACATATCTACTGTACTTAACCCTTCTGCCATTTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCCTCTGAGACTAATATGGTCGATAGAGTGAGTGAGGTAGAAACAAAGATCCAGGATGTCGTTGATGTGGGTAATGACGAAGTAGAAGTGAAAGTGGTAGGTGAAGCAAGGCCTAATCAAAATGATGAACTTGGCAGGCAGGGGCCACAACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGATGGCCCGAGAATGTGGTGCGATAGGTGGGGAGACTTACATTACAGAGGAACCTGGACAAGTTGATTCTGCTGGAGGGGACTCGCTGGCCCAACCTTCCAATGCAGGTGAGGATGGACTCCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCTGACTCATCTACATCAATGGTAGTACCACCGTCACCTGCATCTAATACAAAAGGGAAGAGACAAAAGGGTAAGAATTCTCAACCAGCAGGTCCGTCTTCCCCGTCACCAAGTGCATGCAATTCAACCGATTCGTCCAATGAACCAAATGGAATTTCAAACCTCCCGTGTACTGAAAATAGCTATCCTCAAATTGTGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGACGGTAACCGTTCCAGTTACAAAAGAGGGTAGAAGGCTCGAGGCAGCCCTAGGGAGAAGCATGGAAAAAGCTGTTAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAAAATGCAAAAAATGAGAAGTTGTTGCGAGACCGTTTCCAACATGTTACAGGTTTGATTACTAACTTCATGAACAAGGATCTACCAGCAGTATTGGAGAAAACTGTAAAGAAGGAAATGACTTCAGTTGCGCAAGCTTTAGTTCGTTCAATGTCTCCTGCTATTGAGAAAACATTATCCTCTACTATAGCAGAATCCTTCCAGAGAGGTGTGGGCGACAAGGCAGTGAATCAACTTGATAAATCAGTTAATCTAAAGCTTGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGTCAAACAGGCGCTTCAGGATGCACTCAAATCCAGTTTTGAAACTACAGTGGTCCCTGCCTTTGAGATGTCCTGCAAAGCCTTGTTTGAGCAAGTTGATTCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAACAACGCCTTGAATCTGGGCCAACTTCGTTGGCAATGACTCTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGGCACTTGCAACCTCAAGAACAAACTCTGGCACATTGAATACTCTACCCATCCAGCTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGCACCACTAGATCCCACAAAGGAGCTAGCAAGGTTGATTTCTGAGCGGAAATATGAGGAGGCATTTATTGCAGCACTACACAGAAGTGATGTATCTATTGTATCTTGGTTATGCTCTCAGGTTGATTTACATGGACTTTTGACCTTGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAGCAGCTGGCGTGTGATATCAACAATGACATGTCCCGAAAGCTCTCGTGGATGACAGACGTGGCTACTGCTATTAATCCCTCAGATCCCATGATAACAATGCATGTGCGACCCATCTTCGAGCAAGTCTATCAGATACTGAACCATCAACGTAACTTGCCTTCTATCACTGGATCTGATCTCTCAAGTACCCGTCTTTTATTGCATGTCATCAACTCCATGCTGACGACATGTAAATGA 4152 0.4422 MASPNQPPPSPTPFDMHTFFNPPNPNPNPNPNISSQFPSSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQHQHQQQHHQQNQTNFPIQHRSISFPTPPLQPPQQPQPIPPPSNPNAGARLMALLSTPPIQQQQPPPPQSQPISSGAVNPAITAANAAAAALIRLPSSKVPKGRHLIGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAVQIVGEEKVEHPQICWHCHKQEILIVGMGKNVLRIDTTKVGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTHPLAVFRPHDGHPVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSASEEGWLLPSDTETWKCTQTLELKSSAKLSLKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGPNPESTHMDYMAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENAGLDKSDSSVSRDAITAEGFASLDSSAGRTSEMSLPSSAPKTTMQASSTESGLVSRYPLSSGHTEAPISRQISSSNVEAKTVTLAPSSSDADIVCVPSIPPPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVDRQMDTIHRNLSDQFNSDTKNDDNKIKQDDISTVLNPSAIFKQPTHLVTPSEITKASSSSETNMVDRVSEVETKIQDVVDVGNDEVEVKVVGEARPNQNDELGRQGPQQNPVSDGKEKFFCSQASDLGIEMARECGAIGGETYITEEPGQVDSAGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSMVVPPSPASNTKGKRQKGKNSQPAGPSSPSPSACNSTDSSNEPNGISNLPCTENSYPQIVAMQDSLNQLLTMQKEMQKQMTMTVTVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRFQHVTGLITNFMNKDLPAVLEKTVKKEMTSVAQALVRSMSPAIEKTLSSTIAESFQRGVGDKAVNQLDKSVNLKLEATVARQIQAQFQTTVKQALQDALKSSFETTVVPAFEMSCKALFEQVDSTFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATSRTNSGTLNTLPIQLNNGPLLHEKVEAPLDPTKELARLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHGLLTLVPLPLSQGVVLSLLQQLACDINNDMSRKLSWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRNLPSITGSDLSSTRLLLHVINSMLTTCK* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 97 116 - -
Mtr3g1571 1383 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 25 1383 - -
Mtr3g1571 1383 SUPERFAMILY WD40 repeat-like 213 510 IPR036322 GO:0005515
Mtr3g1571 1383 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 25 1383 IPR045152 GO:0031087
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 807 830 - -
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 1 52 - -
Mtr3g1571 1383 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 247 284 - -
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 600 651 - -
Mtr3g1571 1383 ProSiteProfiles Trp-Asp (WD) repeats profile. 366 399 IPR001680 GO:0005515
Mtr3g1571 1383 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 366 399 - -
Mtr3g1571 1383 ProSiteProfiles Trp-Asp (WD) repeats profile. 247 289 IPR001680 GO:0005515
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 897 951 - -
Mtr3g1571 1383 Gene3D - 172 298 IPR015943 GO:0005515
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 602 651 - -
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 1 120 - -
Mtr3g1571 1383 Gene3D - 1295 1383 IPR044938 -
Mtr3g1571 1383 Gene3D - 300 513 IPR015943 GO:0005515
Mtr3g1571 1383 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 200 512 IPR032401 -
Mtr3g1571 1383 SMART WD40_4 240 280 IPR001680 GO:0005515
Mtr3g1571 1383 SMART WD40_4 362 399 IPR001680 GO:0005515
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 815 830 - -
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 76 96 - -
Mtr3g1571 1383 MobiDBLite consensus disorder prediction 861 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1571 Mtr-Chr3 27524099 27532793 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1571 K12616 - gmx:100798228 2016.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1571 3 27524099 27532793 Mtr3g1571 3 27524099 27532793 ECH