Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0873 ATGGGACAAGAAAACAACTTAACACAAAAGAGAACAACAAGCACAGGAGGATTACCAACAACAACCACCACAACAACAACAAACTCACGTAACCGTACACTGCCACGTGGACGTCAGATCCAAAAAACATTCAACAACATAAAGATCACAATCCTCTGCGGTTTCGTAACAATCCTCGTCCTACGTGGCACAATCGGCGTTAACCTCGGCACATCACAGAACGATGCGGTTAACGCCGCTGTTATCGAGGAAACTAACCGTATCCTCGCTGAGATCCGATCTGATTCCGATCCATCTGATCGGAATCAGACCGAAACTTTTATGAGTTTGAATGAAACTTATGCTCTTGGTCCTAAGATCCTTAATTGGGATACTGAGAGAACAAGTTGGTTAGATAAGAACCGTGAATATCCTAATTTTGTTAAGGGGAAACCTAGGATTTTGCTTCTTACTGGTTCGCCTCCGAAACCGTGTGATAATCCTATTGGTGATCATTATCTTTTGAAATCTATCAAGAATAAGATTGATTATTGCAGATTGCATGGCATTGAAATTGTGTACAACATGGCTCACTTGGACATGGAGCTCGCAGGTTACTGGGCCAAATTGCCCATGATTCGAAGGCTCATGTTATCACATCCTGAAGTGGAGTGGATTTGGTGGATGGACAGTGATGCATTCTTCACTGACATGGTGTTTGAGCTTCCCATGAGTAAATATAAAGATTATAATATGGTTATTCATGGGTATCCTGATTTGTTGTTCGAGCAGAATTCTTGGATTGCAATCAACACAGGGAGCTTTTTGTTTCGCAATTGCCAGTGGTCGTTGGATTTGCTTGATGCTTGGGCCCCTATGGGTCCGAAAGGCCCAATCCGAGAGGAGGCTGGGAAGATTTTGACGGCAAATCTCAAAGGAAGGCCAGCATTCGAGGCTGATGATCAATCGGCATTGATATATTTATTGTTGTCAAAGAAGGACAAATGGATGGAGAAGGTATTTCTTGAGAATTCTTTTTATTTGCATGGTTATTGGGCTGGGTTGGTTGATCGGTATGAAGAGATGATGGAGAAGTATCATCCGGGGCTTGGGGATGAGAGGTGGCCTTTTGTGACGCATTTCGTGGGGTGTAAGCCTTGTGGGAGTTATGGAGATTATCCAGTAGAGAGATGCCTTAGTAGCATGGAGAGGGCTTTTAATTTTGCAGATAATCAAGTGCTTAAACTCTATGGGTTTAGGCACCGGGGATTATTAAGTCCTAAAATCAAGCGGATCAGAAATGAGACCATTACTCCTTTAGAGTTTGTAGACCAGTTTGATATACGAAGGCAACATGAAGGCACCGTGGAACCAAAAAATTAG 1362 0.4288 MGQENNLTQKRTTSTGGLPTTTTTTTTNSRNRTLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGTSQNDAVNAAVIEETNRILAEIRSDSDPSDRNQTETFMSLNETYALGPKILNWDTERTSWLDKNREYPNFVKGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYKDYNMVIHGYPDLLFEQNSWIAINTGSFLFRNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMEKVFLENSFYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETITPLEFVDQFDIRRQHEGTVEPKN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0873 453 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 10 446 IPR008630 GO:0016021|GO:0016757
Mtr3g0873 453 MobiDBLite consensus disorder prediction 1 36 - -
Mtr3g0873 453 Pfam galactosyl transferase GMA12/MNN10 family 144 382 IPR008630 GO:0016021|GO:0016757
Mtr3g0873 453 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 10 446 - -
Mtr3g0873 453 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 143 290 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0873 Mtr-Chr3 12976401 12979904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0873 1 453 Glycosyltransferase AT5G07720 76.805 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0873 K08238 - gmx:100793238 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0873 3 12976401 12979904 Mtr3g0873 3 12976401 12979904 ECH