Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0612 ATGCAGCGAAGAAGAATCAATGTTCATGGGGTTGAACCTTGTGACATATGTGGTCATTTTGGCTTTGGTGAAGTAATTGTTACTTGCTCTAAATGCAAAGTGAATCGTGAACATGTTTACTGCATGAAGATTAATCTCATGGAAGTTCCAGATTACTGGCTTTGTGAACCATGCCAATCCAACAATGGTTCAACTTCACAATGTATAGCGAAGCAGGATTCTGGCTTGCAGGCTTCCAAAAGGCAACAATCTGCTAGAACAGGCCCAAGAGGGAAAGTGAAGTACCTTCAAGAGGATGAAGTTATCAAGCTTTCTAGTTGTAATGTTTCCATCAAACCTACTCCTCCATCGAGCTCCAATTTGCTGATGACTAGGAAGGTTAATCCAGGAAGACCTGCTTTGTCGATGACCAGAAGGGGTCGTGTGGCATCAAAAAGTCTTCTTACAAAGATTCCATCCTTGACTCCGAAACCAAATCCTAGCATATCACCTATGGCACATGGGATGTTTCCAAGAAATGGAGGTCAGAAAAATCCAATAACCAATCTACATGCTTCATCATCATTAGGACCATTAAAGGAGCATAGACTTGCATCTGAACGACGAGTGGGTCCACCAATACCTAACAGAAAAGTTCAATATGCCGATCTTCGTATAGAAAAGCGTACAAGAGAGTCACCCAATAATGATTTATCTGCTACCAAATCTGTACCTGTTGCTGTTTCAGATGTTGCTGAATATAATGTACTTAATATGGAAAAAAGCAAGATTCAGAGTTTTGTTGAAAACTTCCCGCGTTATCAAAAATATTTTCCCTCTTCAATTCGTGCTTGGAGTGGCCAATTCCAAATTCGTCAAGAAGCTGCATCTGGTGGAATTTATGATGGGTTTGAGGCCCAACCTCCATGCACTATTAATAGGAAGGCATACAATCTTTCAAGCAAAATTCCCTCAGTCCTTCAACTGGAATCACTTCCTGCTTTGAATGTCTTGACTGATGAATTCCAGAATTATTCTCCCAGTCTTCAAGATATAGCGTTATACTTCTTTCCATCAGATAACAATGAGAGGTCCAGAAAGAACCTGAACAACCTCTTGAAGTTTATGAATGATGAAAACTTAATGTTGAGAAGTTTAATTAATGGAGTGGAGTTATTTCTATTCACCTCACATAAGCTCAGTGATGATTCAAGGGGTACTATTGCTGTTGTGCATGAAGGATATTTCCTGTGGGGAGTTTTTCGCACAAAGAAATCTGTTACTGCTAATGAAAGATTACCTCCTGACATGGATCCTATTGATGATGATATGGACATTGATATGATGGGAGGAAATGATGTGGGAAGAATTGATAATGTTCTTAATCACAATCTCAAGAGTTCCTCTCAGTTGCCGTTGGAAAGAACACCTCTTCAGAGCAGCACTTCTAAGAAGGTAGAAGAAAAGACCTCAACCTCTTCAAGCAATTTGAATGGTAGGGACATATCAATTTCATCTCAAGAGCTTAGAAAGAAGATCAAAGTTGAGCATTCTTCTGACCCATCATCGGGGAGCCCAGCCAAGAAGTATCGTAAAGTGCTCGACATACTTGATGTTCCACCAGGCTTTCAACCTCATGGTACAAAATAG 1629 0.4015 MQRRRINVHGVEPCDICGHFGFGEVIVTCSKCKVNREHVYCMKINLMEVPDYWLCEPCQSNNGSTSQCIAKQDSGLQASKRQQSARTGPRGKVKYLQEDEVIKLSSCNVSIKPTPPSSSNLLMTRKVNPGRPALSMTRRGRVASKSLLTKIPSLTPKPNPSISPMAHGMFPRNGGQKNPITNLHASSSLGPLKEHRLASERRVGPPIPNRKVQYADLRIEKRTRESPNNDLSATKSVPVAVSDVAEYNVLNMEKSKIQSFVENFPRYQKYFPSSIRAWSGQFQIRQEAASGGIYDGFEAQPPCTINRKAYNLSSKIPSVLQLESLPALNVLTDEFQNYSPSLQDIALYFFPSDNNERSRKNLNNLLKFMNDENLMLRSLINGVELFLFTSHKLSDDSRGTIAVVHEGYFLWGVFRTKKSVTANERLPPDMDPIDDDMDIDMMGGNDVGRIDNVLNHNLKSSSQLPLERTPLQSSTSKKVEEKTSTSSSNLNGRDISISSQELRKKIKVEHSSDPSSGSPAKKYRKVLDILDVPPGFQPHGTK* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0612 542 PANTHER - 2 507 - -
Mtr3g0612 542 SUPERFAMILY FYVE/PHD zinc finger 12 61 IPR011011 -
Mtr3g0612 542 MobiDBLite consensus disorder prediction 458 526 - -
Mtr3g0612 542 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 87 IPR013083 -
Mtr3g0612 542 MobiDBLite consensus disorder prediction 458 497 - -
Mtr3g0612 542 PANTHER ZINC ION-BINDING PROTEIN 2 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0612 Mtr-Chr3 8225778 8233546 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0612 - - mtr:MTR_3g025330 1036.56