Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr3g0583 | ATGTTAGGTTCAAAGAAATCTCCTTTGAAAGATGCTAAACCCAGGTCTAAGCATAATCCCTTTGATTCTGATGAAGAGAAAAAGGATAACAGAAAGAATATTTCTTCAAAGAAGAATTCTTCTCAATATAACCTAGTTCAGAGAGATACTAATACCAACCCTTTTGATGATGTTGATGCTCGTGGTCACTCTTCATCGTCATCTTATGCCCCATCGTATGGTAATCGAAACATGTATAAGAACGACTTCCGTGACTCTGGTGGATTGCAGAGTCAATCTGTGGAGGATTTGGAGGAGTATGCTGTTTACAAAGCTGAAGAGACGACAAAATCGGTAAACAATTGTCGGAAGATAGCAGAGGAAATGCGAGAAGATGCTACCAAGACTTTGGTCATGCTGCATCATCAGGGCGAGCAGATTACTAGGAGTCACGATATTGCTGCTGGCATTGACCATAATTTAAGCAGGGGAGAAAAACTATTGGGAAGTCTTGGTGGCATATTCTCCAAAACATGGAAACCAAAGAAGACGGGCACAATAACAGGCCCTACAATATTTGGAGATGATCCAGTCCGAAAAAGCGCCAACCACTTGGAGCAACGAGAGAAGTTAGGATTAAATTCTGCTCCTAAAGGACAGTCAAAGCCAAGGAAAGCGCTTTCCGAGCCAACAAATGCATTTGAAAGAGTCGAGGTTGAGAAAGAGAAGCAAGATGATGCACTGTCAGATATAAGTGATCTCTTGGGAGAACTGAAGGGCATGGCCATGGACATGGGAACTGAAATTGAGAGGCAAACCAAAGCTATAGATGGATTTGAAAAAGATACTGAGAAGTTGAATATCCGCATGAATGGCGCCAACCAACGTACTCTTCATTTACTTAGAAAATAG | 891 | 0.4164 | MLGSKKSPLKDAKPRSKHNPFDSDEEKKDNRKNISSKKNSSQYNLVQRDTNTNPFDDVDARGHSSSSSYAPSYGNRNMYKNDFRDSGGLQSQSVEDLEEYAVYKAEETTKSVNNCRKIAEEMREDATKTLVMLHHQGEQITRSHDIAAGIDHNLSRGEKLLGSLGGIFSKTWKPKKTGTITGPTIFGDDPVRKSANHLEQREKLGLNSAPKGQSKPRKALSEPTNAFERVEVEKEKQDDALSDISDLLGELKGMAMDMGTEIERQTKAIDGFEKDTEKLNIRMNGANQRTLHLLRK* | 297 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr3g0583 | 296 | CDD | SNARE_Qc | 234 | 289 | - | - | |
| Mtr3g0583 | 296 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
| Mtr3g0583 | 296 | SUPERFAMILY | SNARE fusion complex | 228 | 292 | - | - | |
| Mtr3g0583 | 296 | MobiDBLite | consensus disorder prediction | 204 | 224 | - | - | |
| Mtr3g0583 | 296 | SMART | tSNARE_6 | 97 | 164 | IPR000727 | - | |
| Mtr3g0583 | 296 | SMART | tSNARE_6 | 226 | 293 | IPR000727 | - | |
| Mtr3g0583 | 296 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 231 | 293 | IPR000727 | - | |
| Mtr3g0583 | 296 | MobiDBLite | consensus disorder prediction | 36 | 75 | - | - | |
| Mtr3g0583 | 296 | Gene3D | - | 88 | 165 | - | - | |
| Mtr3g0583 | 296 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 1 | 296 | - | - | |
| Mtr3g0583 | 296 | Gene3D | - | 218 | 296 | - | - | |
| Mtr3g0583 | 296 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 296 | - | - | |
| Mtr3g0583 | 296 | MobiDBLite | consensus disorder prediction | 8 | 35 | - | - | |
| Mtr3g0583 | 296 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 99 | 163 | IPR044766 | GO:0005484|GO:0031201 | |
| Mtr3g0583 | 296 | SUPERFAMILY | SNARE fusion complex | 92 | 162 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr3g0583 | Mtr-Chr3 | 7733057 | 7736973 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr3g0583 | K18211 | - | gmx:100806698 | 405.216 |
Event-related genes