Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3380 ATGCCTTACCCGGAACGCACGTTGAAACATGTTGATACGAAACCACGAAGTCCTACAATTGCTACCATGGAACAATTCCTCCGAGGTAATTGGGATTCCTCTAGGATGTCACCAACCTACTCTCCCACCTCTCCTTCCCCTTCTTCTCCTTTCTTTGAGAGGATGAAGAACCATGACCCTGAAGAAGATCAAAGTCTCTATCAGAGAAAATCTGTTCTCGCCAAAGTGAAGGAGAGGGCCAGGAAATTAGTATTGCGTAACAGCCTCAGCAGGAAAAGACAGGACGACGATAATATCACTCCATCTTGGGGCGTTAGCTTAGAAGACGAAGAAGGAGAAGAAGAAGAAGATGCCGAGTACCTTGGAGCTCCAATCTATGAATCAGAGTTGGCACCAGATGAATACAAAGAAAATGCAAGACAACATCCAAGAGCGAATCCAGTAATATCCGAGAAGCGCGTTTTGAAGATAGTGAAACCAGGAGAGCAAGATCAAGAAAATGCACTTAGTCCTATCAAGTCCCCAACAACAAGAACAACATTTCCTCAACTTGCACCAATAACTACAAATAGTTCAAATCAGAACATGACAATGACTAATCAGAAACCAACACTATCCAACGTTGAAGGATCAAATGCATCATCTCATTCTGCACCCTCAAAATATGGTGTTTGTTCTATAACCCCTGTTGCTCCTCTTAGTTCATCAATGATGCAAAATTCATCATCATCATCTTCATTTTCATCTGCTCCATCGAGTGCGAAGAATACTATTAGCCCTAAAAGTTCATATCCTTCTCAAGCATTAATGAGTCCTAGAAGAAGTAGTTCTAATGGTATTGGTGTGATAGAGAAGGTGAAAGGAGCTGTGAATTCTTTTCTAAGAAATGATGTACAACCACAACAGAAAAATGTTGTAAAAAATCCTATAACACATACTAATTCTTCACAAAGAAACAACACTACTCAAGAAGTTGGTCAAGGAGTTGAGAACCGTGGGAGACTTCTTCAGACAAATTAA 1020 0.4069 MPYPERTLKHVDTKPRSPTIATMEQFLRGNWDSSRMSPTYSPTSPSPSSPFFERMKNHDPEEDQSLYQRKSVLAKVKERARKLVLRNSLSRKRQDDDNITPSWGVSLEDEEGEEEEDAEYLGAPIYESELAPDEYKENARQHPRANPVISEKRVLKIVKPGEQDQENALSPIKSPTTRTTFPQLAPITTNSSNQNMTMTNQKPTLSNVEGSNASSHSAPSKYGVCSITPVAPLSSSMMQNSSSSSSFSSAPSSAKNTISPKSSYPSQALMSPRRSSSNGIGVIEKVKGAVNSFLRNDVQPQQKNVVKNPITHTNSSQRNNTTQEVGQGVENRGRLLQTN* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3380 339 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 221 339 - -
Mtr2g3380 339 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 1 218 - -
Mtr2g3380 339 MobiDBLite consensus disorder prediction 300 339 - -
Mtr2g3380 339 MobiDBLite consensus disorder prediction 235 278 - -
Mtr2g3380 339 MobiDBLite consensus disorder prediction 91 120 - -
Mtr2g3380 339 MobiDBLite consensus disorder prediction 167 222 - -
Mtr2g3380 339 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 218 IPR037491 GO:0009737
Mtr2g3380 339 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 221 339 IPR037491 GO:0009737
Mtr2g3380 339 MobiDBLite consensus disorder prediction 29 66 - -
Mtr2g3380 339 MobiDBLite consensus disorder prediction 159 223 - -
Mtr2g3380 339 MobiDBLite consensus disorder prediction 29 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3380 Mtr-Chr2 47850937 47852463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3380 - - mtr:MTR_2g097710 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3380 2 47850937 47852463 Mtr2g3380 2 47850937 47852463 ECH
Mtr2g3380 2 47850937 47852463 Mtr4g1909 4 32322562 32325515 PCT