Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3325 ATGCTCCAAGTTTGGGATACTGCAGGTCAGGAGCGGTTCCGAACAATTACAACCGCTTACTATCGTGGTGCTATGGGCATATTGCTGGTCTATGATGTTACAGATGAATCTTCATTTAACAATATCACGAATTGGATTCGTAGCATTGAGCAACATTCTTCAGACAATATTGTCAACAAAATACTGGTTGGCAACAAAGTTGACATGGATGAAAGCAAAAGGGCCGTGCCTTTCTCCAAGGGCCAAGCACTAGCCAACAAGTATGGAATCAAATTCTTTGAAACAAGTGCAAAAACAAATCTAAATGTGGATGAAGCTTTCTTCTCAATTGCAAGGGATATAAAACAAAGGCTTCCTGACTCTAAAAAAACGCCGTCAAGAATTAGAATCAACAAACACAACAATGCAACTGCAGCACGTGGTTCACAGAAGTCGGAATGCTGTGGTTGA 450 0.4089 MLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFSKGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAARGSQKSECCG* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3325 149 SMART rab_sub_5 2 117 - -
Mtr2g3325 149 SMART ras_sub_4 1 117 - -
Mtr2g3325 149 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 149 - -
Mtr2g3325 149 PANTHER LD44762P 1 149 - -
Mtr2g3325 149 Pfam Ras family 2 115 IPR001806 GO:0003924|GO:0005525
Mtr2g3325 149 ProSiteProfiles small GTPase Rab1 family profile. 1 149 - -
Mtr2g3325 149 MobiDBLite consensus disorder prediction 118 149 - -
Mtr2g3325 149 SMART rho_sub_3 1 117 IPR001806 GO:0003924|GO:0005525
Mtr2g3325 149 MobiDBLite consensus disorder prediction 130 149 - -
Mtr2g3325 149 ProSiteProfiles small GTPase Ras family profile. 1 149 IPR001806 GO:0003924|GO:0005525
Mtr2g3325 149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 130 IPR027417 -
Mtr2g3325 149 TIGRFAM small_GTP: small GTP-binding protein domain 2 107 IPR005225 GO:0005525
Mtr2g3325 149 Gene3D - 1 147 IPR027417 -
Mtr2g3325 149 PRINTS Transforming protein P21 ras signature 56 69 - -
Mtr2g3325 149 PRINTS Transforming protein P21 ras signature 92 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3325 Mtr-Chr2 47341195 47343149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3325 K07901 - sly:544288 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3325 2 47341195 47343149 Mtr2g3325 2 47341195 47343149 ECH
Mtr2g3325 2 47341195 47343149 Mtr4g1843 4 31533393 31537847 ECH
Mtr2g3325 2 47341195 47343149 Mtr4g1843 4 31533393 31537847 PCT