Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3279 ATGGTTTCTGAAGCCAGCAAGAAAAAAGCTGCTCAGAAGAAGGCTGCCGCCGCTGCAAAGAGAGGAGGGAAGGTTGCCGCCGTGTCATCGAAAAAGGCGGTGGATAGTGTTGCTAACGGAATTGGGGATATTCAGATATCTGATCGGACATGCACTGGTGTTCTATGTTCTCATCCTCTTTCTCGGGATATTCGGATAGAATCTTTATCAGTTACTTTCCATGGACATGATCTAATAGTTGATTCTGAGTTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGATTGAACGGCTGTGGAAAATCTACGCTACTTACAGCAATAGGTTGCCGTGAGCTTCCTATTCCAGACCACATGGATATTTATCACCTTAGCCGGGAAATTGAAGCCTCTGACATGTCTGCGTTGGAGGCTGTCATTAGTTGTGATGAGGAAAGGTTGAAATTGGAGAAAGAAGCTGAAATTCTGGGGGCACAGGAAGATGGCGGTGGTGAAGCACTTGAACGAGTTTTTGAACGGCTGGAAGCTATGGATGCATCAACTGCCGAAAAGCGTGCTGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGCAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGTGGATGGAGAATGAGGATTGCTTTAGCACGAGCCCTGTTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTTGATTTGGAAGCATGTGTGTGGCTGGAGGAGAATTTGAAGAAGTTTGACCGTATTTTGGTTGTGATTTCACACTCCCAAGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAAAAGCTGAAGTTCTATACTGGTAATTATGATCAATATGTTCAGACACGTGCTGAACTGGAAGAGAACCAGATGAAGCAGTACAGGTGGGAGCAGGAGCAGATTGCCTCAATGAAGGAATACATTGCACGATTTGGCCATGGATCAGCAAAACTAGCTCGCCAAGCTCAGAGTAAAGAGAAGACTCTTGCAAAAATGGAGCGTGGTGGACTTACAGAGAAGGTGGTAAGAGACAAAATTTTAGTTTTCCGCTTTGTTGATGTGGGGAAACTTCCCCCACCTGTTCTCCAGTTTGTGGAGGTGACATTTGGCTACACTCCTGATAATCTCATCTACAAGAACATCGATTTCGGGGTCGATTTAGACTCCAGGATTGCTCTGGTTGGACCCAATGGAGCTGGGAAGAGCACGTTCCTGAAGCTTATGACAGGTGATTTGGTTCCCTTAGATGGCATGGTTCGTCGCCATAATCACCTTCGCATTGCACAATTTCACCAGCACTTGACTGAGAAACTAGACTTGGAACTGTCTGCTCTCCAGTTTATGATAAAAGAGTACCCTGGAAATGAGGAAGAAAAGATGAGAGCAGCCATTGGGAAGTTTGGATTGTCGGGTAAAGCACAGGTGATGCCTATGAGAAATTTATCAGATGGACAAAGGAGTCGCGTGATTTTTGCATGGTTAGCCTATAGACAGCCGCACTTGCTACTATTAGATGAGCCAACTAATCATTTAGATATCGAGACAATCGACTCGTTAGCCGAGGCATTGAATGAATGGGATGGTGGCATGGTTCTAGTCAGTCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCTGATCAAACAGTGACCAGATGGGAAGGTGATATTATGGATTTCAAGCTGCACCTAAAGGAAAAGGCAGGTTTATCTGACTGA 1773 0.445 MVSEASKKKAAQKKAAAAAKRGGKVAAVSSKKAVDSVANGIGDIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSALEAVISCDEERLKLEKEAEILGAQEDGGGEALERVFERLEAMDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNYDQYVQTRAELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTFLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLELSALQFMIKEYPGNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKLHLKEKAGLSD* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3279 590 ProSitePatterns ABC transporters family signature. 208 222 IPR017871 GO:0005524
Mtr2g3279 590 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 590 - -
Mtr2g3279 590 Gene3D - 351 588 IPR027417 -
Mtr2g3279 590 SMART AAA_5 400 587 IPR003593 -
Mtr2g3279 590 SMART AAA_5 88 290 IPR003593 -
Mtr2g3279 590 CDD ABCF_EF-3 64 281 - -
Mtr2g3279 590 Coils Coil 282 302 - -
Mtr2g3279 590 Gene3D - 64 328 IPR027417 -
Mtr2g3279 590 PANTHER - 1 590 - -
Mtr2g3279 590 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 375 590 IPR003439 GO:0005524
Mtr2g3279 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 306 IPR027417 -
Mtr2g3279 590 CDD ABCF_EF-3 375 567 - -
Mtr2g3279 590 Pfam ABC transporter 275 347 IPR032781 -
Mtr2g3279 590 Pfam ABC transporter 391 522 IPR003439 GO:0005524
Mtr2g3279 590 Pfam ABC transporter 82 236 IPR003439 GO:0005524
Mtr2g3279 590 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 64 304 IPR003439 GO:0005524
Mtr2g3279 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 569 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3279 Mtr-Chr2 46878349 46882725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3279 375 568 Calmodulin-binding Proteins AT2G36910 26.316 6.83e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3279 K06185 - gmx:100785099 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3279 2 46878349 46882725 Mtr2g3279 2 46878349 46882725 ECH
Mtr2g3279 2 46878349 46882725 Mtr4g1688 4 29383584 29388042 PCT