Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3139 ATGGGTGCTGTAGATGAAGAATACGATTACTTGTTCAAGTTGGTTTTGATCGGTGATTCTGGTGTTGGAAAGTCCAATCTTTTATCTAGATTCACTAGAAATGAATTCAACTTGGAATCCAAATCCACCATCGGTGTTGAATTTGCTACTCGCAGTGTTAGGATTCTTGATAAGCTTGTTAAGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGATATCGTGCAATCACAAGTGCATACTACCGTGGAGCTGTTGGCGCATTGCTGGTGTACGACTCAACAAGGCATGTGACATTTGAAAATGTTGAAAGGTGGTTGAAGGAGCTTCGAGATCACACAGATGCCTATGTTGTAATCATGCTTGTAGGAAACAAAGCAGATCTTAAACACTTGCAAGCTGTGTCAACGGAAGAAGCTACCACATTTGCCGAGAAAGAAAACATATATTTCATGGAAACTTCTGCACTAGAGTCATTGAATGTGGACAATGCTTTCGTCGAAGTGCTCACTCAGATATACAATGTAGTGAGTAAGAAGACTCTTGAGAAAGAGAATGGCTCTGCATCAGTGCCTAAGGGAGAGACTATCAATATTGGTAAAGATGATGTTTCAGATGTTAAGAAGAGTGGATGCTGCAGTACAGCATAG 648 0.409 MGAVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEKENGSASVPKGETINIGKDDVSDVKKSGCCSTA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3139 215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 185 IPR027417 -
Mtr2g3139 215 SMART rho_sub_3 14 175 IPR001806 GO:0003924|GO:0005525
Mtr2g3139 215 CDD Rab11_like 9 173 - -
Mtr2g3139 215 PANTHER DRAB11-RELATED 4 214 - -
Mtr2g3139 215 SMART ran_sub_2 17 211 - -
Mtr2g3139 215 Pfam Ras family 13 173 IPR001806 GO:0003924|GO:0005525
Mtr2g3139 215 ProSiteProfiles small GTPase Ras family profile. 6 215 IPR001806 GO:0003924|GO:0005525
Mtr2g3139 215 ProSiteProfiles small GTPase Rho family profile. 5 173 - -
Mtr2g3139 215 ProSiteProfiles small GTPase Rab1 family profile. 7 212 - -
Mtr2g3139 215 PRINTS Transforming protein P21 ras signature 12 33 - -
Mtr2g3139 215 PRINTS Transforming protein P21 ras signature 35 51 - -
Mtr2g3139 215 PRINTS Transforming protein P21 ras signature 53 75 - -
Mtr2g3139 215 PRINTS Transforming protein P21 ras signature 115 128 - -
Mtr2g3139 215 PRINTS Transforming protein P21 ras signature 150 172 - -
Mtr2g3139 215 SMART rab_sub_5 12 175 - -
Mtr2g3139 215 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 4 214 - -
Mtr2g3139 215 SMART ras_sub_4 9 175 - -
Mtr2g3139 215 Gene3D - 4 212 IPR027417 -
Mtr2g3139 215 TIGRFAM small_GTP: small GTP-binding protein domain 10 168 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3139 Mtr-Chr2 45103847 45106165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3139 K07904 - gmx:100527366 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3139 2 45103847 45106165 Mtr2g3139 2 45103847 45106165 ECH
Mtr2g3139 2 45103847 45106165 Mtr2g0439 2 4391415 4394476 ECH
Mtr2g3139 2 45103847 45106165 Mtr4g2900 4 42659512 42662269 ECH