Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2757 ATGGAATCGATACTGGGTCGGGCACTCGAATACACTCTCAAATATTGGCTCAAATCTTTCACTAGAGATCAGTTCAAATTGCATGGCCACACCGTTCACCTTTCCAATTTAGATATCGATGGTGATGCTTTGCATTCCAGTGTTGGATTACCGGCGGCGTTGAATGTTGCATCAGCGAAAGTTGGAAAGCTCGAGATAACGCTTCCGTCGGTGAGTAATGTGCAAACAGAACCGATTGTTGTGCAAATTGATAAACTTGATCTTGTTCTGGAGGAGAATTCTGATTTTGATGCATCTTCAACTTCAAACAGTTCCACCTCTTCGCCTGCGCCTGCCAAGGGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGCATGACTATACAGATTCAAACAGTTAATCTATTGCTAGAAACTCGCGGTGGTTCTCGTCGACAAGCGGGAGCAACATGGGCACCGCCTATGGCATCTATGACCATACGCAACCTTATGCTGTATACCACAAACGAAAATTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAGTTCTCCAGTAACAAAAAGTACATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCCATTGATCTTTTGCCACATCCAGACATGTTCGCAGATGTGGAAGAGGGATCAAACCAGAGGGATGATGATGGCGCAAAGAGAGTATTCTTTGGAGGAGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACTGAATTGAACAGTCCACTTGGACTTGAGGTTCAGTTGCACATCAATGAAGCTGTTTGCCCTGCGTTAAGTGAACCAGGACTTCGTGCACTTCTACGCTTCATGACCGGAGTATATGTTTGTCTAAACAGGGGTGATGTTGATTCAAAGGCTCAGAAGCGCTCCACTGAAGCAGCCGGATGCTCTCTCGTTTCAATTGTTGTAGATCATATATTTCTTTGCATTAAAGATGCTGAATTCCAGCTTGAGTTTTTGATGCAGTCCCTCTTCTTCTCTAGGGCCAGTCTTTCTGAAGTGGATAACGACAAGAACTTGACCAAGATTACAATCGGTGGATTATTTTTGAGGGACACCTTTTCTTCCCCTCCATGTACTATAGTGCAACCATCAATGCAAGCTTTCACGGGAGAGGCTTTTCATGTGCCAAAATTTGCTAGAAGTTTTTGCCCTCCAATATATCCTCTAGGAGAACAACAATGGCAGTTGACCGAGGGTACCCCTCTAATATGCCTCCATGCTCTCCAGATCATACCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACTGTTATTGACTGCCAGCCTCTTATGATTCATCTCCAAGAAGAGTCATGCCTGAGGATATCCTCTTTTTTAGCTGATGGTATCGTTGTCAGTCCTGGTGACATTTTACCGGACTTCTCAGTGAAATCTTTTATTTTTACTCTCAAGGGACTGGATCTTACAGTTCCTTTTGACAAGGACAAATTGGAAATTTCTAGAAGTGTCATGGACAATACAACCAATACCTCCTTTACTGGAGCAAGGCTTCATATTGAAAACCTTTCATTTTTAGATTCACCTTCATTGAAACTAAGAATACTGAACCTTGACAAGGATCCTGCTTGCTTCTGTCTTTGGGAAGGTCAACCAGTTGATGCTACCCAAAAGAAATGGACTGTCAGAGCATCGCAGCTTACATTGTCTCTGGAAGCATGCACGGGTACAGCTGGACGTCAGACTGCAGGATTATGGAGATGTGTTGATCTGACAGAAGCTTGCATTGAAGTAGCCATGGCAACAGTCGATGGAAGCCCGTTGTTAAAAATTCCTCCTCCAGGGGGTATTGTCAGGGTTGGAGTTGCTTGCGAACAGTATGTGTCCAACACTTCTGTTGAGCAATTATTTTTCGTACTAGATCTCTATGGTTATTTTGGAAAAGTTAGTGAAATGATGTCAGTTGCTGGAAAAAGGAAACAACTGGAGGACATTCGGGACAAATCTTCCAGTGGAAAGCTTATGGACAAGGTTCCTAGCGACACTGCTGTGAGTTTAGCAGTGAAAGACCTCCAACTTCGATTCCTGGAGTCTTCATCAATAAATGTTGAGGGACTGCCATTAGTGCAATTTGTTGGAGATGATCTGTTTACCAGTGCCACTCACAGAACCCTTGGTGGGGCTATTGTTGTTTCATCTTCTCTACGCTGGGAGAGTGTTGAGATAAGTTGTGTGGATGCTGAGGGGAAGTTGGCATGTGAATCTTTGAGTTCTAGCATAAATGCTCCTTCACCGAGTGATAATGGATATCCTCATCTCAGAGCTGTATTCTGGGTGCATAAGAACGATAGACATCTAATGGATAGAAATGCACGTTCTTTCCCTTTTCTGGACATAAGCACGGTTCATGTCATACCATTACACGAACAAGACCCGGAGTCTCATAGTTTGAATGTCTCAGCTTTTGTATCTGGTGTTCGTCTTGGTGGGGGAATGAACTATACTGAAGTCCTACTGCATAGATTTGGAATACTTGAGCCTGATGGTGCTCCTGGGAAGGGTCTTTGTAAAGGGTTGGAAAACTTACAAAAGGGACCATTGTCAAAACTTTTTAAGTCAAATCCTCTGATTGTTGATAATTCAGAAGATGTTGAAAGCACGGGCGATGGGAAAGAATCAGGTTTTCCCCACTTGAAGAAGCCAGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTCGAAGGTGCCGAGGATACGGCTGAAAAGTGGTGGTTCTCCAGCCATGAAGATGAAGGAAGAGAAGAGAGATGTTGGCACACATCTTTCCATAGTTTGCAAGTAAATGCAAAAGGTAGCCCGAATAATGTTACCAGTGGAAAAGGACAAATACATAGAATACGGCATCATCCAGTAGAACTGGTCACGGTTGGAGTTCAAGGGCTGAAAATCCTGAAGCCTCGTTTCCAAAAACACATTCCTTCATCACTGGTAATAGGCAATGGGGTTAAGGAATTTACTGATGCAGTTGGAGGAGTTGGTCTTGAAGTTCGCTTGATATTATGTGAGGAGGATGTTGATGATGAAACAACTAACTGGGAAGTGGAAAATCTAAAATTTTCTGTGCAACAGCCGGTTGAGGCAGTTGTAACAAAGGATGAGCTTCAGCATCTTACTTTTTTGTGCAAATCTGAAATTGATTCAATTGGCCGGATAACTGCTGGAATTATACGGTTGCTTAAGTTAGAAGGCTCTGTTGGTCAGTCTGTAATAGATCAACTAGGCAACCTAGGAAGCGAAGGCATTGATAAGATGTTCTCCGGTGAAAAGTTTAGTAGAGACGGTAGTATTGGTAGTAGAGGACTTTCTCCGTTACCAAACCTGATAAGCGAAGGACCAAACAAAACTCCGGAACAGACATTAGCTTTGCTTGAGGAAGCAGTTATGGATTCACAGGCTAAAATCAATGATTTAATCAATGATGTTGGTACTTCAGAGTCTTCTTCCTCCCAACACCTTACCATCGTCAAACTGAGTCAAAAGATAGAAGCTATGCAGGGCTTATTAGTGCAATTGCGGGATCAACTTTAA 3612 0.4286 MESILGRALEYTLKYWLKSFTRDQFKLHGHTVHLSNLDIDGDALHSSVGLPAALNVASAKVGKLEITLPSVSNVQTEPIVVQIDKLDLVLEENSDFDASSTSNSSTSSPAPAKGSGYGFADKIADGMTIQIQTVNLLLETRGGSRRQAGATWAPPMASMTIRNLMLYTTNENWQVVNLKEAREFSSNKKYIYVFKKLEWQSLSIDLLPHPDMFADVEEGSNQRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDSKAQKRSTEAAGCSLVSIVVDHIFLCIKDAEFQLEFLMQSLFFSRASLSEVDNDKNLTKITIGGLFLRDTFSSPPCTIVQPSMQAFTGEAFHVPKFARSFCPPIYPLGEQQWQLTEGTPLICLHALQIIPSPLPPSFASQTVIDCQPLMIHLQEESCLRISSFLADGIVVSPGDILPDFSVKSFIFTLKGLDLTVPFDKDKLEISRSVMDNTTNTSFTGARLHIENLSFLDSPSLKLRILNLDKDPACFCLWEGQPVDATQKKWTVRASQLTLSLEACTGTAGRQTAGLWRCVDLTEACIEVAMATVDGSPLLKIPPPGGIVRVGVACEQYVSNTSVEQLFFVLDLYGYFGKVSEMMSVAGKRKQLEDIRDKSSSGKLMDKVPSDTAVSLAVKDLQLRFLESSSINVEGLPLVQFVGDDLFTSATHRTLGGAIVVSSSLRWESVEISCVDAEGKLACESLSSSINAPSPSDNGYPHLRAVFWVHKNDRHLMDRNARSFPFLDISTVHVIPLHEQDPESHSLNVSAFVSGVRLGGGMNYTEVLLHRFGILEPDGAPGKGLCKGLENLQKGPLSKLFKSNPLIVDNSEDVESTGDGKESGFPHLKKPDDVDVTIELRDWLFALEGAEDTAEKWWFSSHEDEGREERCWHTSFHSLQVNAKGSPNNVTSGKGQIHRIRHHPVELVTVGVQGLKILKPRFQKHIPSSLVIGNGVKEFTDAVGGVGLEVRLILCEEDVDDETTNWEVENLKFSVQQPVEAVVTKDELQHLTFLCKSEIDSIGRITAGIIRLLKLEGSVGQSVIDQLGNLGSEGIDKMFSGEKFSRDGSIGSRGLSPLPNLISEGPNKTPEQTLALLEEAVMDSQAKINDLINDVGTSESSSSQHLTIVKLSQKIEAMQGLLVQLRDQL* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2757 1203 Pfam N-terminal region of Chorein or VPS13 1 101 IPR026854 -
Mtr2g2757 1203 Coils Coil 1148 1168 - -
Mtr2g2757 1203 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1202 - -
Mtr2g2757 1203 PANTHER UNCHARACTERIZED 1 1202 IPR026728 -
Mtr2g2757 1203 Coils Coil 1182 1203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2757 Mtr-Chr2 40868070 40882988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2757 - - gmx:100803142 1960.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2757 2 40868070 40882988 Mtr2g2757 2 40868070 40882988 ECH