Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2752 ATGTCTATTTTGGATTGGAACAATAAAATGCAGCTGCATATATCTCCAAGTTTGAGGCATGTTACTGTCCTTCCTGGCAAAGGACTTAAAGAGTTTATCAAAGTGAAAGTTGCATCGAGGCGCCTTTCTTATAGGATGCTCTTCTATTCACTCTTGTTCTTCACTTTTCTTCTGAGGTTTGTGTTTGTTCTAACAGCTGTGGATGGCATTGATGGACAAAACAAGTGCTCTTCCATAGGTTGTCTAGGAAAAAAATTAGGGCCAAGGATTTTGGGTAGACGACCTGAATCAACTGTCCCAGAAGTGATATACCAAACTTTAGATGAACCACTTGGCAATGATGAACTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAGTTCATGGTTAAAATGAAGGAAGGTGGATATGATGCCAAAACATTTGCAGTTAAACTTAGAGAAATGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAGTATCTATATCGCCATGTAGCATCAAGCAGCATACCGAAACAACTTCATTGTCTTGACTTGAGATTAGCACATGAGCATACCAACAACGCAGCAGCACGCCTTCAGCTACCGTCTGCGGAACTAGTTCCTGCCCTTGTTGACAATTCCTATTACCATTTTGTTTTAGCCTCAGATAATGTGCTTGCTGCCTCGGTTGTTGCAACATCACTCGTTCGTAACTGTTTACGACCTAATAAGGTTGTTATACACATAATTACAGACCGAAAGACTTATTATCCGATGCAGGCTTGGTTCTCATTGCATCCTTTATCACCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTTCAAAGGGGAAGGTGCCTGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTGCGGTCTCAGTTTAGGGGAGGTTCATCGGCTATAGTTGCGAATACATCTGAGAAGCCAAATGTTATTGCAGCAAAACTACAGGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATTCGGATACATCTACCCGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGATGACATTGTGATACAAACTGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAAGTGAATGGAGCAGTGGAAACATGCAATGGAGAAGACAAGTTTGTGATGTCGAAAAGGTTGAAAAGTTATTTGAACTTTTCTCACCCTCTAATATCTGAAAATTTCAATCCCAACGAATGTGCTTGGGCCTATGGCATGAACATTTTTGATTTGGAAGCTTGGAGGAGGACCAATATAAGCAATAAATATCATCATTGGGTTGCGCAGAATATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACGTTATAGATCCTTTCTGGCATATGCTTGGATTGGGATATCAGGAAAATACAAATGTTGACGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCAGAACTAAGGTCATTGTGGACAAAATATGTCGACTTCTCAGATAAGTTCATTAAAAGCTGCAACATTAGAGCATGA 1626 0.4084 MSILDWNNKMQLHISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDGIDGQNKCSSIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPLGNDELKGRFDIPQTLEEFMVKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISENFNPNECAWAYGMNIFDLEAWRRTNISNKYHHWVAQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGRAKPWLDIAFPELRSLWTKYVDFSDKFIKSCNIRA* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2752 541 Pfam Glycosyl transferase family 8 218 515 IPR002495 GO:0016757
Mtr2g2752 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 218 536 IPR029044 -
Mtr2g2752 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 216 539 IPR029044 -
Mtr2g2752 541 CDD GT8_like_1 216 528 - -
Mtr2g2752 541 Coils Coil 539 541 - -
Mtr2g2752 541 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 20 539 - -
Mtr2g2752 541 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 20 539 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2752 Mtr-Chr2 40775162 40779511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2752 10 541 Glycosyltransferase AT5G54690 79.588 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2752 K20867 - gmx:100802623 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2752 2 40775162 40779511 Mtr2g2752 2 40775162 40779511 ECH