Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2748 ATGGCTCCTCTAACAAATTTGCATGGAGTCTCCAAAACTTTAACTCCAATTACATGCCTTGTTCCAAATGCACAAAGAACCTTTAAGACAGGACAAGTAGTAGTTGGATTTCTTGGAAGCAAAACAAAGAAAATATCAGAATGTGAATCAGTTAACACTACAAGAAGAGCAGCTGCAATAAGCCTTGTTTCTTTAGTTCTTACAGGACAATTCAGTGAGAAGATTTCACTGGCTAAGGATAATGGATTTTGGATTGATGGACCTATTCCAGAACCAACTGTCACTAATAATATTGCAAATGAGAAAACTGGGACGCGTTCTTTTATTAAAAAGAAACTCTACATGGCAAATATTGGAGCAAAAGGAAGTGTTTTAAGGATCAAGAAATATGCATTTGATCTTCTTGCAATGGCGGATTTGATTGCACAAGACACACTCAACTATGTTAGGAGGTACCTAAGACTCAAGTCAACATTCATGTACTTTGATTTTGACAAGGTTATCTCTGCTGTCCCAGTTGAAGATAAGCAACAATTAACTGATGTGGCAAACAAATTGTTTGATAATTTTGAAAAGCTTGAAGAAGCTTCAAGGAACAAAAATCTACTTGAAACACAAGCATGCTATAAAGAAACTGAAGTTATGCTTAAAGATGTCATGGACAGGATGACTATAATGTATAAAACAATTTGA 693 0.3521 MAPLTNLHGVSKTLTPITCLVPNAQRTFKTGQVVVGFLGSKTKKISECESVNTTRRAAAISLVSLVLTGQFSEKISLAKDNGFWIDGPIPEPTVTNNIANEKTGTRSFIKKKLYMANIGAKGSVLRIKKYAFDLLAMADLIAQDTLNYVRRYLRLKSTFMYFDFDKVISAVPVEDKQQLTDVANKLFDNFEKLEEASRNKNLLETQACYKETEVMLKDVMDRMTIMYKTI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2748 230 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 47 223 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Mtr2g2748 230 Gene3D - 86 224 IPR023222 -
Mtr2g2748 230 SUPERFAMILY Oxygen-evolving enhancer protein 3, 114 223 IPR023222 -
Mtr2g2748 230 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 1 223 - -
Mtr2g2748 230 Coils Coil 176 196 - -
Mtr2g2748 230 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 223 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2748 K08901 - gmx:100814163 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2748 2 40755960 40757707 Mtr2g2748 2 40755960 40757707 ECH