Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2743 ATGGCTGGTAGAGGCAAAACCCTAGGTTCCGGTTCTGCTAAAAAAGCCACCTCAAGAAGCAGCAAAGCTGGTCTTCAATTCCCCGTTGGCCGTATCGCTCGTTTCCTCAAAGCCGGAAAATACGCTGAACGTGTTGGTGCTGGTGCTCCTGTTTACCTCGCCGCTGTTCTTGAATATCTCGCCGCTGAGGTTTTGGAATTGGCTGGAAATGCTGCAAGAGACAACAAGAAGACAAGAATTGTGCCAAGACACATTCAATTGGCTGTGAGGAACGATGAAGAATTGAGCAAGCTTCTTGGTGATGTTACTATTGCTAATGGTGGTGTTATGCCAAATATTCACAACTTGTTGCTTCCAAAGAAAGCTGGTGGTAACAACAAGGGTGCTGATGATGAATGA 399 0.4637 MAGRGKTLGSGSAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGGNNKGADDE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2743 132 CDD H2A 9 121 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 Pfam Core histone H2A/H2B/H3/H4 12 90 IPR007125 GO:0003677
Mtr2g2743 132 SUPERFAMILY Histone-fold 10 123 IPR009072 GO:0046982
Mtr2g2743 132 Pfam C-terminus of histone H2A 93 125 IPR032454 -
Mtr2g2743 132 SMART h2a4 4 124 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 ProSitePatterns Histone H2A signature. 23 29 IPR032458 -
Mtr2g2743 132 PANTHER HISTONE H2A 2 129 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 MobiDBLite consensus disorder prediction 1 22 - -
Mtr2g2743 132 PRINTS Histone H2A signature 15 37 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 PRINTS Histone H2A signature 44 59 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 PRINTS Histone H2A signature 59 72 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 PRINTS Histone H2A signature 73 87 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 PRINTS Histone H2A signature 101 119 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mtr2g2743 132 Gene3D Histone, subunit A 1 129 IPR009072 GO:0046982
Mtr2g2743 132 PANTHER HISTONE H2A.6 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2743 Mtr-Chr2 40723770 40724688 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2743 K11251 - gmx:100810491 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2743 2 40723770 40724688 Mtr2g2743 2 40723770 40724688 ECH