Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2727 ATGCCTACTTCTCTTGATTATGATCTCTCCCAAAAAAACAAGAAAACTCTTGATTTCATAGAGGATATTACTACACATGCAGATGAAATCCAAAAAAAGGTCCTAGCTGAAATCCTCAACCGCAATGCAAATGTTGAATATTTGCAAAGACATGGTCTCAATGGCCATACAGATAGTGAAACTTTCAAGAAACTTCTCCCTATCATAACCTATGAAGATATTCAAAATGATATTAACCTTATTGCCAATGGTGATACTTCTCCAATCCTCACCTCAAACCCCATATCAAACTTTCTCACTAGCTCAGGAACTTCTGGTGGTGAGAGAAAGTTGATGCCAGCAACAGAAGAAGAATTTGGAAGAAGATATTTACTCTATAGTTATTTAATGCCAATAATGAGTCAATTTATTCCTGACCTAGAGAAAGGTAAAGGAATGTACCTAATGTTCATAAAAAATGAATCTAAAACACCAGGAGGAATTAAAGCTAGTCCAGTTCTAACAAATTATTACAAAAGTTCTCATTTTCTAAATAGACCTTATGATCCATACACAAATTTCACAAGTCCAAATGAAACTGTTCTTTGTCTAGACTCATACCAAAGTATGTATTCACAACTTCTATGTGGTCTTATTCAAAACAACGAGGTACTTCGTGTCGGCGCTGTTTTTGCGTCTGGTCTCATTCGTGCCATTCGATTCCTCGAAAAAAATTGGAGACTTCTTTGTAACGATATACGAACAGGAACTCTCGACCTCCTTATCACTGACGATTCGGTGAGAGAGGCTGTTATGAAAATTCTTAAACCTAACAAAAATCTTGCTGATTTTGTTGAAGGTGAATGTAACAAAGGTTCTTGGCAAGGTATTATAACTAGGTTGTGGCCTAATACTAAGTATGTAGATGTTATTGTGACAGGAACAATGTCACAGTACATTCCTACTTTGGATTACTATAGTAATGGGTTACCACTAGTTTGTACTATGTATGCATCTAGTGAATGTTACTTTGGTGTTAACCTTAATCCTCTTTCTAAGCCTTGTCATGTGTCTTATACTCTTATCCCCACCATGTGCTACTATGAATTTTTACCTGTTAATAGAAGTAACTGTGAGGTCAATGGATCAATTCCACCATCAACAACAAAATCTCTTGGTGAGAAAAAATATCAAGAGGTGGTGGATCTTGTTGATGTCAAGCTTGGTCAAGAATATGAGCTTGTTGTTACTACTTATGCTGGACTTTATAGGTACAAAGTAGGCGATGTATTGAAAGTGACAGGATTCAAGAACAAGGCACCACAATTCAGCTTTGTTTGCAGAAAAAACGTTGTCTTAAGCATAGAATCAGACAAAACAGATGAAGTTGAGTTACAAAATGCAATGAAAAATGCAGTGACACATTTAGCACCATTTGAAGCAGATGTAGCTGAGTACACTAGTTATGCAGACACAACAACAATTCCAGGACACTATGTGTTGTATTGGGAATTGAACCTTAAAGGGTCAACAAAAATTCCACATAGTGTTTATGAAGATTGTTGTTTAACAATTGAGGAATCATTAAACAGTGTTTATCGACAAGGTCGTGTTTCAGATAAATCAATTGGTCCACTTGAGATTAAGATTGTTGAGCAAGGTACATTTGATAAGCTTATGGATTATGCTATTAATTTGGGGGCTTCAATTAATCAATACAAGACTCCTAGGTGTGTGAAATTTGCACCTATGGTGGAGCTTTTGGAATCAAGAGTTATGGCAAAGTATTTTAGTCCTAAATGTCCAAAATGGGTTCCTGGCCATAAGAAGTGGAATAATGAGTGA 1824 0.3607 MPTSLDYDLSQKNKKTLDFIEDITTHADEIQKKVLAEILNRNANVEYLQRHGLNGHTDSETFKKLLPIITYEDIQNDINLIANGDTSPILTSNPISNFLTSSGTSGGERKLMPATEEEFGRRYLLYSYLMPIMSQFIPDLEKGKGMYLMFIKNESKTPGGIKASPVLTNYYKSSHFLNRPYDPYTNFTSPNETVLCLDSYQSMYSQLLCGLIQNNEVLRVGAVFASGLIRAIRFLEKNWRLLCNDIRTGTLDLLITDDSVREAVMKILKPNKNLADFVEGECNKGSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLSKPCHVSYTLIPTMCYYEFLPVNRSNCEVNGSIPPSTTKSLGEKKYQEVVDLVDVKLGQEYELVVTTYAGLYRYKVGDVLKVTGFKNKAPQFSFVCRKNVVLSIESDKTDEVELQNAMKNAVTHLAPFEADVAEYTSYADTTTIPGHYVLYWELNLKGSTKIPHSVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAINLGASINQYKTPRCVKFAPMVELLESRVMAKYFSPKCPKWVPGHKKWNNE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2727 607 Pfam GH3 auxin-responsive promoter 20 573 IPR004993 -
Mtr2g2727 607 PANTHER - 7 604 - -
Mtr2g2727 607 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 604 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2727 Mtr-Chr2 40480997 40484094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2727 4 591 EF-hand Containing Proteins AT1G23160 48.911 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2727 K14487 - gmx:100791987 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2727 2 40480997 40484094 Mtr2g2727 2 40480997 40484094 ECH