Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2668 ATGAACAAACCCATTCTCATTTCTCAAGAAGACCAACTCCTCCAACAACAACACCAACACCAACACCAACACCAACAACTAGACCAACAAGATTTCTTTTACGAATCAAACGACCGTTTACTCTCTCTTTCCTCTTCCTGCTCTTGTTCTAACTCCAACTCTGACCAAGAAGACGAAGACCAAGAAAACAACAACAATAATTGTAATTACAATTTTGCCCTTAACAGTTACGACATATGGATCTCTCAACCTTCTTCCGTTTCAGAACGTCGTACTCGTCTTCTTCAAACTATTGGTCTCTCTTCCGATTTTGCCCTTTCACGTGGTAACCCAATCCCACCTTACAATGCCATATTCCGATCCAAATCTGACGGTCATAACAACAATTCTAATAACTCCTGTTTTATCTCTTCTACTGTAAATGTAAATACTTCTGTTCCCGGTAATTCTGGCGGATCCCCAGCTAAACCTCCATCTGGAAAGAATTCTTCTAGAAGAAGTCATTCCGGTGTTGATTTCTTGCCGGGGAATTCTTCTACTTTGCCGGACACGGGTGAAATTTCTGGTGAAGCTGTGCTTTCTAAAGAGATAGAATGTGATGAAATTGAAAAAGGGGAAGAACAAGCTTGTACTATCAGAGATCTTGATAATGGAAAAGAGTTTGTTGTGAAAGAAGTTAGAGAAGATGGAATGTGGAATAAAGTGAAGGAGGTTGGTACTGGGAGACAGTTGACTATGGAGGAATTTGAGATGACGGTTGGTCAATCTCCGATTGTGCAGGAGCTTATGCGCCGGCAGAATCACGAGGAGACTGGTGATGTAGCCGGTGGTGGTGTTGGAAATGGGAGTAATGGTAATGGAGGTTGTTCTAAGGGGAAGAAGAAAGGAGGGAGTTGGTTGAAGAGCATCAAGAGTGTTGCTAGTTCAATGGCGGGTCATAAGGAGAGGAGGAGTAGTGATGAGAGAGATACTTCGTCGGAGAAAGGCGGGAGGAGGTCGAGCTCGGCTACGGATGATAGTCAAGATGGTTCATTTCATGGACCTGAGAGGGTGAGAGTGAGACAATATGGGAAATCATGTAAAGAGTTAACTGCATTGTATAAGAGTCAAGAAATTCAAGCTCATAATGGATCAATTTGGAGTATTAAGTTTAGTTTAGATGGGAAATATCTTGCTAGTGCCGGTGAGGATTGTGTGATTCATGTTTGGCAGGTTGTGGAGTCTGAGAGGAAAGGGGAGTTGTTGCTTATGGAGAAACAGGAGGATGTTAATGTTAATATGTTATTTCTTGTTAATGGGTCGCCGGAACCCGCGACCTTGTCTCCTTTGGCGGATAATCTTCTGGAGAGGAAGAGAAAGGGGAGGTCGTCCGTTAGTAGGAAGTCGATGAGTTTGGACCAGTTTGTGGTCCCTGAACATGTGTTTGCACTCACTGAAAAACCCGTTTGCTCCTTTAAAGGTCATTTGGATGATGTGCTTGACCTCTCTTGGTCCAAGTCTCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTTTGAAGATTTTTTCACACAGTGACTATGTAACTTGCATCCACTTTAATCCTGTCGATGATAGATACTTCATTAGTGGATCTTTGGATGCTAAGGTTCGCATATGGAGCATTCCGGATCGACAAGTTGTTGATTGGATTGATCTTCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGTGCACTAGTTGGTTCATACAAGGGTAGCTGTCATTTATATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTGCAGAACAAGAAAAAGAAATCAAATCACAAGAAAATTACTGGTTTCCAGTTTGCCCCAGGAAGTTCATCAGAAGTACTTATCACATCTGCTGACTCTCGAATACGGGTTGTTGATAGTATTGATCTGGTTCATAAGTTTAAAGGCTTTCGAAATGCAAGTAGCCAGATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTTGCTGCAAGTGAGGATTCCCATGTATACATCTGGAAAAATGAAGCCGATTGCAGGCCCAACAGAAGTAAAGGTGTCACCGTGACACAGTCGTATGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCCTGGCCTGGTATGGGTGATGCATGGGACATGCATGATACATTTTCTGGAGCGCAACCTGAGCTTGATAGCAACAATGACGAAATCGCATCAGCCAATCATCCTCCTACACCTGTAGAGGAAAACTTCGGTGTCGAGGGTTCACGGTCTGCTTCAGGTTACAATAGTCCACATCACGCAACCATTGCGAGTGCGACAAACAGTTACTTTTTTGATAGAATTTCTGCAACATGGCCAGAAGAAAAACTTCTTCTAGCTGCAAGAAATCAAAGCCCTCGTGTCAGTATGGATTTCTCAAATGGGGTAAGTCAAAAAATGTCAGCCTGGGGTATGGTGATTGTTACTGCCGGTCTTCGAGGTGAGATTAGAACTTTCCAAAATTTTGGATTGCCACTTCGAATATAA 2577 0.4276 MNKPILISQEDQLLQQQHQHQHQHQQLDQQDFFYESNDRLLSLSSSCSCSNSNSDQEDEDQENNNNNCNYNFALNSYDIWISQPSSVSERRTRLLQTIGLSSDFALSRGNPIPPYNAIFRSKSDGHNNNSNNSCFISSTVNVNTSVPGNSGGSPAKPPSGKNSSRRSHSGVDFLPGNSSTLPDTGEISGEAVLSKEIECDEIEKGEEQACTIRDLDNGKEFVVKEVREDGMWNKVKEVGTGRQLTMEEFEMTVGQSPIVQELMRRQNHEETGDVAGGGVGNGSNGNGGCSKGKKKGGSWLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLMEKQEDVNVNMLFLVNGSPEPATLSPLADNLLERKRKGRSSVSRKSMSLDQFVVPEHVFALTEKPVCSFKGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIHFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSNHKKITGFQFAPGSSSEVLITSADSRIRVVDSIDLVHKFKGFRNASSQISASLTANGKYIVAASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWDMHDTFSGAQPELDSNNDEIASANHPPTPVEENFGVEGSRSASGYNSPHHATIASATNSYFFDRISATWPEEKLLLAARNQSPRVSMDFSNGVSQKMSAWGMVIVTAGLRGEIRTFQNFGLPLRI* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2668 858 MobiDBLite consensus disorder prediction 145 186 - -
Mtr2g2668 858 MobiDBLite consensus disorder prediction 740 779 - -
Mtr2g2668 858 SMART WD40_4 478 516 IPR001680 GO:0005515
Mtr2g2668 858 SMART WD40_4 365 404 IPR001680 GO:0005515
Mtr2g2668 858 SMART WD40_4 652 693 IPR001680 GO:0005515
Mtr2g2668 858 SMART WD40_4 612 651 IPR001680 GO:0005515
Mtr2g2668 858 SMART WD40_4 519 558 IPR001680 GO:0005515
Mtr2g2668 858 SMART WD40_4 561 599 IPR001680 GO:0005515
Mtr2g2668 858 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 372 405 - -
Mtr2g2668 858 ProSiteProfiles Trp-Asp (WD) repeats profile. 372 413 IPR001680 GO:0005515
Mtr2g2668 858 Pfam WD domain, G-beta repeat 655 693 IPR001680 GO:0005515
Mtr2g2668 858 Pfam WD domain, G-beta repeat 371 403 IPR001680 GO:0005515
Mtr2g2668 858 Pfam WD domain, G-beta repeat 521 558 IPR001680 GO:0005515
Mtr2g2668 858 Pfam WD domain, G-beta repeat 480 515 IPR001680 GO:0005515
Mtr2g2668 858 ProSiteProfiles Trp-Asp (WD) repeats profile. 485 525 IPR001680 GO:0005515
Mtr2g2668 858 PANTHER WD REPEAT DOMAIN 44 119 858 IPR040324 -
Mtr2g2668 858 PANTHER WD REPEAT DOMAIN 44 24 105 IPR040324 -
Mtr2g2668 858 MobiDBLite consensus disorder prediction 310 335 - -
Mtr2g2668 858 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 485 519 - -
Mtr2g2668 858 MobiDBLite consensus disorder prediction 145 185 - -
Mtr2g2668 858 PRINTS G protein beta WD-40 repeat signature 391 405 IPR020472 -
Mtr2g2668 858 PRINTS G protein beta WD-40 repeat signature 503 517 IPR020472 -
Mtr2g2668 858 PRINTS G protein beta WD-40 repeat signature 545 559 IPR020472 -
Mtr2g2668 858 ProSiteProfiles Trp-Asp (WD) repeats profile. 525 559 IPR001680 GO:0005515
Mtr2g2668 858 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 119 858 - -
Mtr2g2668 858 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 24 105 - -
Mtr2g2668 858 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 525 559 - -
Mtr2g2668 858 Gene3D - 358 717 IPR015943 GO:0005515
Mtr2g2668 858 MobiDBLite consensus disorder prediction 270 351 - -
Mtr2g2668 858 MobiDBLite consensus disorder prediction 742 756 - -
Mtr2g2668 858 SUPERFAMILY WD40 repeat-like 368 695 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2668 Mtr-Chr2 39712662 39718510 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2668 K20241 - gmx:100815065 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2668 2 39712662 39718510 Mtr2g2668 2 39712662 39718510 ECH