Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2656 ATGGATCGTCTTCTCAAATCCGCCAGATCATCCGGTTCTCTCAACCTCTCCAACCGCTCCCTCAGTGAAGTCCCTGTTGAAGTTTATCGCAATCTCGATGGAATCGGTGGCGATGATGATAAATGGTGGGAGGCTGTGGAGCTTCAGAAACTCATTTTGGCTCACAATAGTATTGAATTGTTAAAGGAAGATATCAGAAATTTATCTTGTCTCGTTGTTTTGAATCTTAGCCACAATAGTCTTTCTCAGCTTCCTGCTGCCATTGGAGAGCTACCAGAGCTGAAGATGTTGGATGTTTCGCATAATTTGATAGTTAGAATACCGGAGGAGATTGGATCAGCTGCGTCACTTGTGAAGTTTGATTGTTCAAATAATCAGCTCACAGAACTTCCTAGTGAGCTAGGAAGATGCTTGGCGTTGTCGGACTTAAAGGGATCAAACAATCTTATTGCAAGCTTGCCAGAAGATTTAGCAAAATGTTCCAAATTGTCTAAGCTAGATATGGAGGGAAACAAGCTTACAGTGATATCTGAAAATCTCATTTCATCATGGACAATGCTTACAGAATTAAATGCAGCAAAAAACATGCTGAATGGCATACCAGTCGGCATTGGAGGCCTTTCACGTTTAATTCGTCTTGATCTCCATCAGAACAGAATCTCATCAATCCCTTCATCAATCATTGGTTGTCATTCACTTGCAGAGTTTTATTTGGGGAATAATAATATTTCTACAATACCAGTGGAGATAGGAGAACTTTCTCGGCTTGGGACATTTGATCTTCACTCTAACCAGCTGAAGGACTATCCTGTGGAGGCATGCAAATTGAGTCTTTTAGTCTTGAATCTTTCAAATAATTCATTGAGTGGGTTACCTCCTGAAATGGGCAAGATGACTAGCTTGAGGAAACTTCTGCTTAGCGGAAACCCATTGCGGACTCTTAGAAGCTCATTAGTCACTGGACCTACACCAGCATTACTGAGATTTCTCCGGAGTAGACTTTCTCAAGGTGAAGATTCTGAAACTGCAACCACTTCAAAAAAGGACATAATTGCAATGGCTACCCGATTATCTATTTCTTCAAAGGAACTTTCTATGGGAGGGTTAGAGTTGAGTGCTATTCCATCTCAAGTATGGGAATCCGAGGAGGTCATAAGACTTGATCTTTCCAAAAACTCAATCCAGGAGTTGCCGGTTGAACTTTCTTCCTGTGTTTCCCTCCAGACATTGATTTTATCGAAGAATCAAATTAAAGACTGGCCAGGTTCAGTTCTTAAATCACTTTCGAGTCTTTCATGTTTGAAGCTGGACTACAATCCCCTCAGACAGATACCTTCCAATGGTTTTGAAGCGGTGCCTAAGCTTCAGATCCTGGATCTAAGTGGTAATGAAGCTTCATTACTAGATGGCCCTTCATTTTCTAGTTTGCCAAACCTTCAAGAGCTATACCTGAGAAAAATGCGTCTCACTAAAGTCCCGTCAGATATATTGGGGTTGCATCAACTACGGATCCTTGACTTGAGTCAGAATTCCCTTCAATCAATTCCAGAGGGGCTAAAAAATATCACTTCTCTCGTGGAGCTTGACCTATCTAATAACAACATCTCATCCCTTCCACCTGAGCTGGGCCTGCTGGAACCAAGCCTTCAGGCATTGAGACTTGATGGGAACCCACTTAGAAGCATTAGGAGGACTGTCTTGGATAAAGGAACTAAAGCTGTTCTGAAATATTTGAAGGACAAATTGCCAGAGGAGTAG 1758 0.4187 MDRLLKSARSSGSLNLSNRSLSEVPVEVYRNLDGIGGDDDKWWEAVELQKLILAHNSIELLKEDIRNLSCLVVLNLSHNSLSQLPAAIGELPELKMLDVSHNLIVRIPEEIGSAASLVKFDCSNNQLTELPSELGRCLALSDLKGSNNLIASLPEDLAKCSKLSKLDMEGNKLTVISENLISSWTMLTELNAAKNMLNGIPVGIGGLSRLIRLDLHQNRISSIPSSIIGCHSLAEFYLGNNNISTIPVEIGELSRLGTFDLHSNQLKDYPVEACKLSLLVLNLSNNSLSGLPPEMGKMTSLRKLLLSGNPLRTLRSSLVTGPTPALLRFLRSRLSQGEDSETATTSKKDIIAMATRLSISSKELSMGGLELSAIPSQVWESEEVIRLDLSKNSIQELPVELSSCVSLQTLILSKNQIKDWPGSVLKSLSSLSCLKLDYNPLRQIPSNGFEAVPKLQILDLSGNEASLLDGPSFSSLPNLQELYLRKMRLTKVPSDILGLHQLRILDLSQNSLQSIPEGLKNITSLVELDLSNNNISSLPPELGLLEPSLQALRLDGNPLRSIRRTVLDKGTKAVLKYLKDKLPEE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2656 585 ProSiteProfiles Leucine-rich repeat profile. 406 427 IPR001611 GO:0005515
Mtr2g2656 585 SMART LRR_typ_2 405 427 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 547 569 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 160 183 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 68 89 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 452 475 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 231 251 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 91 114 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 428 451 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 253 276 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 115 137 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 382 404 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 277 297 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 207 230 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 298 321 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 522 545 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 476 498 IPR003591 -
Mtr2g2656 585 SMART LRR_typ_2 499 521 IPR003591 -
Mtr2g2656 585 SMART LRR_bac_2 114 133 - -
Mtr2g2656 585 SMART LRR_bac_2 207 226 - -
Mtr2g2656 585 SMART LRR_bac_2 68 87 - -
Mtr2g2656 585 SMART LRR_bac_2 275 295 - -
Mtr2g2656 585 SMART LRR_bac_2 499 518 - -
Mtr2g2656 585 SMART LRR_bac_2 524 542 - -
Mtr2g2656 585 SMART LRR_bac_2 428 447 - -
Mtr2g2656 585 SMART LRR_bac_2 160 179 - -
Mtr2g2656 585 SMART LRR_bac_2 91 110 - -
Mtr2g2656 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 454 533 - -
Mtr2g2656 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 214 488 - -
Mtr2g2656 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 132 - -
Mtr2g2656 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 523 584 - -
Mtr2g2656 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 137 228 - -
Mtr2g2656 585 SUPERFAMILY L domain-like 40 317 - -
Mtr2g2656 585 SUPERFAMILY L domain-like 361 560 - -
Mtr2g2656 585 ProSiteProfiles Leucine-rich repeat profile. 209 230 IPR001611 GO:0005515
Mtr2g2656 585 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Mtr2g2656 585 PRINTS Leucine-rich repeat signature 278 291 - -
Mtr2g2656 585 PRINTS Leucine-rich repeat signature 499 512 - -
Mtr2g2656 585 ProSiteProfiles Leucine-rich repeat profile. 501 522 IPR001611 GO:0005515
Mtr2g2656 585 ProSiteProfiles Leucine-rich repeat profile. 524 545 IPR001611 GO:0005515
Mtr2g2656 585 SMART LRR_sd22_2 207 232 - -
Mtr2g2656 585 SMART LRR_sd22_2 404 433 - -
Mtr2g2656 585 SMART LRR_sd22_2 91 113 - -
Mtr2g2656 585 SMART LRR_sd22_2 160 182 - -
Mtr2g2656 585 SMART LRR_sd22_2 522 540 - -
Mtr2g2656 585 SMART LRR_sd22_2 45 70 - -
Mtr2g2656 585 SMART LRR_sd22_2 499 521 - -
Mtr2g2656 585 Pfam Leucine rich repeat 255 311 IPR001611 GO:0005515
Mtr2g2656 585 Pfam Leucine rich repeat 477 535 IPR001611 GO:0005515
Mtr2g2656 585 Pfam Leucine rich repeat 406 463 IPR001611 GO:0005515
Mtr2g2656 585 Pfam Leucine rich repeat 47 104 IPR001611 GO:0005515
Mtr2g2656 585 PANTHER LRR RECEPTOR-LIKE KINASE 523 584 - -
Mtr2g2656 585 PANTHER LRR RECEPTOR-LIKE KINASE 214 488 - -
Mtr2g2656 585 PANTHER LRR RECEPTOR-LIKE KINASE 14 132 - -
Mtr2g2656 585 PANTHER LRR RECEPTOR-LIKE KINASE 454 533 - -
Mtr2g2656 585 PANTHER LRR RECEPTOR-LIKE KINASE 137 228 - -
Mtr2g2656 585 Gene3D Ribonuclease Inhibitor 3 177 IPR032675 -
Mtr2g2656 585 Gene3D Ribonuclease Inhibitor 331 468 IPR032675 -
Mtr2g2656 585 Gene3D Ribonuclease Inhibitor 274 330 IPR032675 -
Mtr2g2656 585 Gene3D Ribonuclease Inhibitor 178 273 IPR032675 -
Mtr2g2656 585 Gene3D Ribonuclease Inhibitor 469 581 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2656 13 559 Receptor kinase-like Gene Family AT5G07280 30.993 6.16e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2656 - - mtr:MTR_2g079560 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2656 2 39626202 39636679 Mtr2g2656 2 39626202 39636679 ECH