Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2647 ATGGAGGTTGTGCAAGAGAATCTCCAAATTCCCGAAAAAATAGAATACACCACCCTCACTCCCCTTCCTCTTCCTCTCACCGCCGATGATTCCCCAGATTCCGATAACCACGAACAATACTCCGTTTTCCGCAACGAAATCTCTCTCGACACCCCCCAAGTCAATTCGGTTTCTTCTACTGCCATAGATTTCTTCTCCCTCGACGTCGCTGATGAAATTGAACCCGAAGACAACCTCCCGGAGCCTGTCACGCCTGTTGAGCCGAAGACACCGGCTATCGAACACGAGGTGAAGCTAGAGAATGGTTGGTTTCGTGGGGATTGTAAATTCAAAAGCCCTATGCTTCAGCTTCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCACCTACTCCAGAAGAGAAAGCTAAACGTGATGCGGCAATTGAATCTGTTTTTGAAGTTATTAAACATATTTGGCCTCATTGTCAGGTTGAAGTTTTTGGGTCTTTCAGGACAGGGTTGTATCTTCCAACTAGTGATATTGATGTTGTGATTTTGAAATCAGGCTTACCAAAACCACAGATTGGTTTGAATGCAATTTCTAGATCATTGTCACAAAGGAGCATGGCTAAAAAGATACAGGTCATTGGAAAGGCTCGCGTGCCAATTATTAAATTTGTTGAAAGGAAGAGTTGTCTTTCCTTTGATATAAGTTTTGACTTAGAGAACGGACCGAAGGCTGCCGAGTATATTCAGGATGCAGTGGCTAAGTGGCCACCATTACGGCCATTGTGTTTGATTTTAAAAGTATTTTTACAACAAAGAGAACTTAATGAGGTATATTCTGGTGGGATTGGTTCTTATGCTCTCCTGACCATGCTGATGGCAATGTTGCGGAATGTCCGACAGAGCCAAGCTTCTGCAGAGCACAACTTAGGGCTCCTTTTGGTACATTTTTTCGATATTTATGGACGTAAATTGAATACCTCAGATGTTGGTGTAGATTGTAATGGAGAAGGCACCTTTTTCCAAAAGAGTAGTCGAGGGTTTTACAACAAAGCACGGCCATTGCTTCTCGGAATTCAGGATCCACAGACTCCAGACAATGACATTGGGAAGAATTCCTTCAATTACTTCCAGGTCAGGTCAGCGTTTTTAATGGCTTACTCAACTTTAACAAATCCCAAGGTCATCCTGAGCTTAGGACCTAATAGGAGCATCCTTGGCACTATAATTAGACCAGACCCCGTCTTGATGGAGCGCAAAGGGGGGTCAAACGGAGAAATGACTTTTAATAGTTTACTCCCCGGTGCTGGTGAGCCAATACGACAGCAGTACGGAGAGCATGATATGTTATGCAATTGGCAGTTAGATTTTGAAGAAGAACCACTACCTCGTGGAGACGGAGATAACACCCCTGCGGAGCCCAGCACACGCTCTTCCAGGAAAAAGAGAAAATCTGCATCTAAGGAGAATAAGGAAAATGGATCTGTGACAGAAAACGGTGTACATAAGAAACATAAGAAAAAACGGGTTAAACAGAGGTTAGAGGCCAGTTGCTGA 1545 0.435 MEVVQENLQIPEKIEYTTLTPLPLPLTADDSPDSDNHEQYSVFRNEISLDTPQVNSVSSTAIDFFSLDVADEIEPEDNLPEPVTPVEPKTPAIEHEVKLENGWFRGDCKFKSPMLQLHKEIVDFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKSGLPKPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVERKSCLSFDISFDLENGPKAAEYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQASAEHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQKSSRGFYNKARPLLLGIQDPQTPDNDIGKNSFNYFQVRSAFLMAYSTLTNPKVILSLGPNRSILGTIIRPDPVLMERKGGSNGEMTFNSLLPGAGEPIRQQYGEHDMLCNWQLDFEEEPLPRGDGDNTPAEPSTRSSRKKRKSASKENKENGSVTENGVHKKHKKKRVKQRLEASC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2647 514 Gene3D Beta Polymerase, domain 2 130 238 IPR043519 -
Mtr2g2647 514 CDD NT_PAP_TUTase 137 247 - -
Mtr2g2647 514 MobiDBLite consensus disorder prediction 455 514 - -
Mtr2g2647 514 MobiDBLite consensus disorder prediction 471 496 - -
Mtr2g2647 514 PANTHER POLY(A) RNA POLYMERASE 99 503 IPR045862 GO:0004652|GO:0031499|GO:0043631
Mtr2g2647 514 Pfam Cid1 family poly A polymerase 305 363 IPR002058 -
Mtr2g2647 514 SUPERFAMILY PAP/OAS1 substrate-binding domain 253 392 - -
Mtr2g2647 514 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 99 503 - -
Mtr2g2647 514 Pfam Nucleotidyltransferase domain 144 236 IPR002934 GO:0016779
Mtr2g2647 514 SUPERFAMILY Nucleotidyltransferase 113 265 IPR043519 -
Mtr2g2647 514 Gene3D - 112 388 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2647 K03514 - gmx:100811320 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2647 2 39514277 39521152 Mtr2g2647 2 39514277 39521152 ECH