Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2642 ATGGACCCTGATGTCGTTGAAATTCCTCCACCAATTCACCAACACCCTCCTAGACTCAAAAAGCAGAAGAAACAGTCCATTGTCCATGATGTGATTGACATTGATGACGGCGACAATGATGATGATGATTTAATGGTAATTGGTGAAATAAGTCGTAAACGTAAAAAGGGGAAGACACTTGAAGCCATTCATGAGGATGTGCTTGGTGAAACTAGTGTTTTAAAATCTGCCAAAGCTAGACGTAATAGAGCAGCTGTTGTTCCCCCGGGTTTGACAATCACTGATGAACCTGAAAATGAAACTCTGAAGAAACTTCGAAGCTTTAAGCAATTTGACGCCGTCGCGGACAGTTCGGACCATTACTTTATTAAAAATCATTCCTCCATGAAGCAGAATCCAAAGAGTTGGGCTAAAAAAATCCAGGAAGAGTGGAAGATTTTGGAGGAGCATTTTCCGGATACAATATTTGTGAGAGTCTACGAATCAAGGATGGATCTCATGAGGGCTGTGATTATTGGAGCAGAAGGGACTCCTTACCATGATGGTCTTTTCTTTTTTGATGTTTACTTTCCCCCTGGATATCCCAATGGACCCCCCGTCCACTACCACTCCGGTGGTCTTCGGCTCAACCCTAATTTGTATGCCTGTGGCAAAGTATGCCTCAGTCTACTTAACACCTGGTCTGGTGACAAAAATCAGATGTGGACTCCAGGTGTTTCGACAATGCTACAGGTTCTAGTCTCCATACAAATTCTAATCTTGAATGCAAAGCCTTACTTCAATGAACCTGGATGGGCACCTTCAAAGGGCACACCGGGCGGTGAAGCTAGTTCCCTGCAGTATAATGAGAATACGTTCATTCTATCGTTGAAGACAATGATGTATATGATTAGAAAGCCTCCAAAGAATTTCGAAGACCTTGTTGTGGGGCATTTCTACAGCAGAGCACATGATATCCTGAGGTCATGTAAAGCATACACGGAAGGTGTTCAAGTTGGTTGTTTGGCCAAAGGCGGAGTTCAAGATGTTGATGAGGGTGAAGGAAAATGCTCAAGATAA 1059 0.4315 MDPDVVEIPPPIHQHPPRLKKQKKQSIVHDVIDIDDGDNDDDDLMVIGEISRKRKKGKTLEAIHEDVLGETSVLKSAKARRNRAAVVPPGLTITDEPENETLKKLRSFKQFDAVADSSDHYFIKNHSSMKQNPKSWAKKIQEEWKILEEHFPDTIFVRVYESRMDLMRAVIIGAEGTPYHDGLFFFDVYFPPGYPNGPPVHYHSGGLRLNPNLYACGKVCLSLLNTWSGDKNQMWTPGVSTMLQVLVSIQILILNAKPYFNEPGWAPSKGTPGGEASSLQYNENTFILSLKTMMYMIRKPPKNFEDLVVGHFYSRAHDILRSCKAYTEGVQVGCLAKGGVQDVDEGEGKCSR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2642 352 SUPERFAMILY UBC-like 124 301 IPR016135 -
Mtr2g2642 352 MobiDBLite consensus disorder prediction 1 25 - -
Mtr2g2642 352 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 135 294 IPR000608 -
Mtr2g2642 352 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 75 348 - -
Mtr2g2642 352 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 7 67 - -
Mtr2g2642 352 MobiDBLite consensus disorder prediction 1 15 - -
Mtr2g2642 352 Pfam Ubiquitin-conjugating enzyme 140 258 IPR000608 -
Mtr2g2642 352 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 75 348 - -
Mtr2g2642 352 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 7 67 - -
Mtr2g2642 352 Gene3D Ubiquitin Conjugating Enzyme 94 345 IPR016135 -
Mtr2g2642 352 SMART ubc_7 138 294 - -
Mtr2g2642 352 CDD UBCc 138 263 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2642 Mtr-Chr2 39452918 39495842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2642 108 336 Miscellaneous Gene Families AT2G33770 57.759 5.38e-88 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2642 K10581 - gmx:100809853 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2642 2 39452918 39495842 Mtr2g2642 2 39452918 39495842 ECH