Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2627 ATGGCTGCAACTACCACTAGCTTTGGAACTGCTTGGTGTCTTAGAAGAGTAACTCAAGCTTTTGCACTTTCTCATTCTCATACTCTCCGCACCAATGGCAATAATCTCTCTTTTCAAAGGACTCTTACCTCTCATCTTCTCTCGTTTTCCACTTCTTCAGATTCAGGTGCAAGTACGACAGTGCAAGCTTCAAAACGAGAAGTTGATGTATTGCTCAAGGGAGTTGGGGAGAAAAGTGTAGAAAATGAAGTGAAGCATGTCCTTGAGATGGCTAGACGAGCATCATTAAAACGAGAGATTCTCCATACAAATTTTCTAACACCTCCAGTGCTAAAAGAATCTATGCAAGTATTGGAAAAATTAGCGGATATTAAAGCATTGGCTCAAGGAGGTTATCCACAGGCTGAACGGTGCCGGATTTCTGTTGGACATCCAGATGAACTGACAAGTGATCCAGATGTTATTTCAGCATTGAGTATTACAGGCAACTTCCAGTTTGAACCTTGCTCTCACGGTGACTTCCTTGGCTCAATTCTTGGTACAGGAATTGCCAGGGAGAAAGTTGGGGATATTATATTGCAGGGAGAACAGGGTGCTCAGATAATTGTTGTACCAGAGCTTGTTGAATTTCTTACGTCAGCACTGGATAAGGTTCGTAACGTTCCAGTAACTTGCACCAAGATACCATTAATTTCTCTTGATTATGAACCGCCAAGAACAAAATCTTTCAAAACTATAGAAGCGTCACTAAGAGTTGATGCAGTAGCTAGTGCAGGATTTAAGATTTCACGTTCGAAGCTAGTTGACATGATCAGCAATGGCGATGTACGTATCAACTGGATCCCAATTACTACAAAAGGAACCACAGTCAAGAGTGGAGATCTTGTATCAGTTAGCGGATTGGGAAGATTAAAGATAGGAGAAGTAAACACCACAAAGAAAGGAAAATTTGCAGTGGAACTCATTCGATATTTGTAG 978 0.4121 MAATTTSFGTAWCLRRVTQAFALSHSHTLRTNGNNLSFQRTLTSHLLSFSTSSDSGASTTVQASKREVDVLLKGVGEKSVENEVKHVLEMARRASLKREILHTNFLTPPVLKESMQVLEKLADIKALAQGGYPQAERCRISVGHPDELTSDPDVISALSITGNFQFEPCSHGDFLGSILGTGIAREKVGDIILQGEQGAQIIVVPELVEFLTSALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKIGEVNTTKKGKFAVELIRYL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2627 325 Gene3D - 151 233 IPR012677 -
Mtr2g2627 325 ProSiteProfiles S4 RNA-binding domain profile. 250 316 - -
Mtr2g2627 325 Pfam S4 domain 251 296 IPR002942 GO:0003723
Mtr2g2627 325 SMART s4_6 250 312 IPR002942 GO:0003723
Mtr2g2627 325 Pfam Putative RNA-binding domain in YlmH 156 230 IPR040591 -
Mtr2g2627 325 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 61 325 - -
Mtr2g2627 325 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 61 325 - -
Mtr2g2627 325 TIGRFAM PS_II_S4: photosystem II S4 domain protein 80 323 IPR017506 -
Mtr2g2627 325 SUPERFAMILY Alpha-L RNA-binding motif 109 312 - -
Mtr2g2627 325 Gene3D - 77 144 - -
Mtr2g2627 325 Gene3D - 244 300 IPR036986 GO:0003723
Mtr2g2627 325 CDD S4 251 300 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2627 - - gmx:100793767 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2627 2 39291007 39297825 Mtr2g2627 2 39291007 39297825 ECH