Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2616 ATGGCAGCAAGTGGCATTTCAGATGGCACAGCAACACAGAACACAGAACCTGAAATGGAGAAGAAATGGTGGAACAAAATCTTGGACATTAAGGAAGCCAAACATCAACTCATGTTTGCACTGCCAATAATTCTTACAACAATATTATATTACTCAATTACTTTGGTTTCTGTCATGCTTGTTGGTCATCTTGGTGAGCTTCAGTTAGCCGGTGCTACTCTTGCTAACTCGTGGTTTGGTGTCACTGCCGTCGGGGTTATGGTTGGTTTAAGTGGTGCACTGGACACACTCTGCGGACAAGCATTTGGTGCAAAAGAATATCACATGTTAGGAATTTATCTACAAAGCTCTTGCATTATATCTTTTATTTTTTCCATCATTATATCAATTATTTGGTTCTATACAGAACCCATTCTAGTGTTACTTCATCAATCACAAGACATTGCTAGAACAGCTGCACTCTATATGAAGTTTCTTATACCAGGATTATTTGCATATAGCATCTTGAGAAACATGTTGAGGTTTCTACTAACACAATCTGTAGTGATGCCACTGGTTGTCTTTTCAGCTATCCCAGCAATTGTTCATGTTGGTATTGCATATGGATTTGTTCATTGGTCAGGTCTTAATTTCAAAGGTGGACCAGTTGCAACTTCTATTTCACTATGGATATCTATGATATTAGTAGGTTTTTATATCTTGTATGCAAAGAAGTTTAAGAATACATGGAGGGGATTTTCAATGCAATCATTTCAGTACTTGTTTACAAACTTGAAACTAGCTCTTCCCTCTGCAGCAATGCTATGTTTGGAGTCTTTGGCCTTTGAAGTTTTGGTTTTCTTAGCTGGATTAATGCCAGACTCACAAATAACAACTTCATTGATTGCAATATGTGCAAACACAGAACTCACCGCTTACCTGATCATTTATGGTCTTAGTGCAGCCGCAAGCACAAGGGTTTCCAATGAACTTGGGGCAGGCCAACCAGAAAGAGCCAAACATGCAATGAGAGTCAGTCTAAAGCTCTCTATCCTCCTTGGATTCTGTTTTGCGTTGATGATTGTATTTGGTCATGGTATATGGATTCGGCTGTTTAGCAGTAGTCCTACTATCAAACATGAGTTTGCTTCAATAGCACCCTTCCTTGCTATTTCCATACTACTTGATTCTGTCCAAGGTGTCTTATCAGGGGTGGTTAGAGCATGCGGTTGGCAGCATGTTGCTGTTTACGTCAACCTTGCAACTTTTTATTTCATTGGTTTACCAATTTCATGTATCCTTGGATTTAAGACCAATTTGCAATATAAGGGTTTATGGCTTGGTCTGATTTGTGGGCTGGCATGTCAAACTGGGACACTCTTACTTTTGACAAGATATGCGAAATGGACTAAACTGAATCTCTCAGGAGACAAAGATAAAGATCAACCTGTTGTTGTTTTGACGACTGAATGCATGCCAATTAGGACTGAATAA 1473 0.3917 MAASGISDGTATQNTEPEMEKKWWNKILDIKEAKHQLMFALPIILTTILYYSITLVSVMLVGHLGELQLAGATLANSWFGVTAVGVMVGLSGALDTLCGQAFGAKEYHMLGIYLQSSCIISFIFSIIISIIWFYTEPILVLLHQSQDIARTAALYMKFLIPGLFAYSILRNMLRFLLTQSVVMPLVVFSAIPAIVHVGIAYGFVHWSGLNFKGGPVATSISLWISMILVGFYILYAKKFKNTWRGFSMQSFQYLFTNLKLALPSAAMLCLESLAFEVLVFLAGLMPDSQITTSLIAICANTELTAYLIIYGLSAAASTRVSNELGAGQPERAKHAMRVSLKLSILLGFCFALMIVFGHGIWIRLFSSSPTIKHEFASIAPFLAISILLDSVQGVLSGVVRACGWQHVAVYVNLATFYFIGLPISCILGFKTNLQYKGLWLGLICGLACQTGTLLLLTRYAKWTKLNLSGDKDKDQPVVVLTTECMPIRTE* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2616 490 Pfam MatE 42 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g2616 490 Pfam MatE 263 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g2616 490 PANTHER PROTEIN DETOXIFICATION 16 473 - -
Mtr2g2616 490 TIGRFAM matE: MATE efflux family protein 42 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g2616 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 473 - -
Mtr2g2616 490 CDD MATE_eukaryotic 32 464 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2616 Mtr-Chr2 39175659 39179917 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2616 K03327 - gmx:100816310 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2616 2 39175659 39179917 Mtr2g2616 2 39175659 39179917 ECH