Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2577 ATGAGAAACATTACAAAAATAGCATGCTTCAATATTTTCTTTCTTTCTATAATAGCACTTCATGTTCAAAGCCGTTTTCTTCCCAATAAATTGATTTCCAATGGAGTTGATGATGTTCAAGCAGAAGAAGATTCATATCTACTTCTTAACAATGATAATGACAAAGGAGTTATTACTGAATCTTCTTCTAATTCAGAGGAGTATTGTAAACAAATGTATGGGTTTTTGCCATGTTCTAATAACATTCTTGGTCATTTATTTCTGATATTGGTTTATGAGTACTTATTGTTCCATGGAGAATCATATTTGGCTGCTGGAGGTGAACAAATATTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCCCTTCCAGAGTCCTTAATTCTTCTTGTTACTGGACTTTCAAGTGATAAGGAGAGTGCACAAGAGTATGCTTCCACTGGAGTTGGATTGTTAGCTGGATCATCCATCTTGCTTCTCACAGTTGTGTGGGGGACCTGTGTTATTGTTGGCAAGCAAAGCTTACGAAATGACTCTCATTCTTCTGATACCTCAAATTCATCAACAGGAAGAATAAAACAAGCTTTGACTGGTTATGGTATTACTATGGATGTAGACACTAGAAAGATGGCAAGAATTATGCTTTTCTCTGTTATACCACTCCTCATAATGCAGATTCCTACATTGTTCCAATTCTCTACAACATTACACAATGTGACCTTGATGATTTCTCTCATCATTGCTGTCACTTTTCTCGTCTCATACTTTATTTATCAGATCTTTAAACCTCAGATAGAGAAAACAAGATTAGAATACATAAAACATGATGAATTGATTTTAAGAATCTTTGAACGTGTTGAAAAGCAAACTCTACAAACGATCCTAACTGAGGATGGAACTCCTGATGTAGATGCCATAAATCGGTTATACCATGAATTCAATCAACATGGGAGAGAACACTTATCACCTTCTGATGTAAGAGAGTTGTTGTTTGGGAACAATTTAACCAGCACAGAAATTAGAGATGAACAAATAACAGACATGTTAAAAGTTTTTGACAAAGATGGTGACCAAATTATAACCAAGGAAGAATTTGTTAATGGCGTAACAGAATACTTTAACCAAACAAAGCATGCTTTGCATAAACAGTACATTCCCAAAGAAAATATGAGCAGAATGTATCAGAGTTTTATCAAACCATGGATTGAGCACACGAGAAAAGAGCGTGAATTGAAAGAACATCTTATTTCTGGAGTCTTAAGTCATGCTCAGAGTGATAGGGTTGGTAGGCTGCTCAAAGATGACGGTACACCTGATAAAGATGCTATCAAAAGGTTCTTTGAGGAAATTGATAGCAATGACGATAAAAGTGTTTCGAGATCTGAGTTAGAAAATGCAGTGAAGAAGATTAAGTTTGGTAAGACTGCAGAGGAAGCAGTCACAAAATTCCTTCAAGTTCTTGATGTCAACGGAGACAATGAAATTAGTGAGACTGAATTTGTTGATGGTATAACCGAATTGATAAACTCATATTTTGGACAAGATGCTAGCTCAAAATCTCCTTCTCATCATGAAACTCATCAAACATGGGAAGATGTTGAGAAGGTAATGGAAGAGAATCAAACCAAAGGGGTGACTGCATGGTTAGAAGCTATAGCATATGTGGTGTTGGGAATTACTATGTTGTCAATTCTTGCGGAGCCTCTAATAGCAAGTGTTCAAAAATTCTCCGAAGCTGCAGGAATTTCATCATTTTTCATCTCTTTCATTTTAGTCCCTTTGGCTACAAATTTTAGAGAAGCAACCTCAGCTATCAAAGAAGCTAGCCACAAAAAAAGTAGTAACACTTCTCACACGATGTATGAGATCTATGGAGCAGTGTTTATGAACAACATTCTTGGTTTTGTAGTGATATCTATCCTTATATATATGAGAGATATCACTTGGGAATTTTCAGCTGATGTATTGGTGGTGGCAATTGTTTGTATTGTGATGGGTCTCACTACTAGTTTTCGTTCCACTTTTCCTCTGTGGACATCCTTCCCAACATACCTCTTGTATCTGATATCATTGGTTATGGTTTTTGTTCTTAAAGATGTTCTCAATTATATGTAA 2136 0.3596 MRNITKIACFNIFFLSIIALHVQSRFLPNKLISNGVDDVQAEEDSYLLLNNDNDKGVITESSSNSEEYCKQMYGFLPCSNNILGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIVGKQSLRNDSHSSDTSNSSTGRIKQALTGYGITMDVDTRKMARIMLFSVIPLLIMQIPTLFQFSTTLHNVTLMISLIIAVTFLVSYFIYQIFKPQIEKTRLEYIKHDELILRIFERVEKQTLQTILTEDGTPDVDAINRLYHEFNQHGREHLSPSDVRELLFGNNLTSTEIRDEQITDMLKVFDKDGDQIITKEEFVNGVTEYFNQTKHALHKQYIPKENMSRMYQSFIKPWIEHTRKERELKEHLISGVLSHAQSDRVGRLLKDDGTPDKDAIKRFFEEIDSNDDKSVSRSELENAVKKIKFGKTAEEAVTKFLQVLDVNGDNEISETEFVDGITELINSYFGQDASSKSPSHHETHQTWEDVEKVMEENQTKGVTAWLEAIAYVVLGITMLSILAEPLIASVQKFSEAAGISSFFISFILVPLATNFREATSAIKEASHKKSSNTSHTMYEIYGAVFMNNILGFVVISILIYMRDITWEFSADVLVVAIVCIVMGLTTSFRSTFPLWTSFPTYLLYLISLVMVFVLKDVLNYM* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2577 711 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Mtr2g2577 711 Pfam EF-hand domain pair 448 509 IPR002048 GO:0005509
Mtr2g2577 711 Pfam Sodium/calcium exchanger protein 559 702 IPR004837 GO:0016021|GO:0055085
Mtr2g2577 711 CDD EFh 450 512 IPR002048 GO:0005509
Mtr2g2577 711 Gene3D - 390 527 - -
Mtr2g2577 711 SMART efh_1 486 514 IPR002048 GO:0005509
Mtr2g2577 711 SMART efh_1 449 477 IPR002048 GO:0005509
Mtr2g2577 711 SMART efh_1 351 379 IPR002048 GO:0005509
Mtr2g2577 711 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 551 710 - -
Mtr2g2577 711 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 10 392 - -
Mtr2g2577 711 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 400 516 - -
Mtr2g2577 711 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Mtr2g2577 711 Gene3D - 259 389 - -
Mtr2g2577 711 SUPERFAMILY EF-hand 312 512 IPR011992 -
Mtr2g2577 711 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 10 392 - -
Mtr2g2577 711 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 400 516 - -
Mtr2g2577 711 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 551 710 - -
Mtr2g2577 711 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Mtr2g2577 711 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Mtr2g2577 711 ProSiteProfiles EF-hand calcium-binding domain profile. 347 382 IPR002048 GO:0005509
Mtr2g2577 711 ProSiteProfiles EF-hand calcium-binding domain profile. 482 517 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2577 Mtr-Chr2 38720881 38727988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2577 400 704 EF-hand Containing Proteins AT1G53210 39.450 1.40e-58 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2577 - - gmx:100799062 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2577 2 38720881 38727988 Mtr2g2577 2 38720881 38727988 ECH