Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2576 ATGAGAAACATTACAAAAATAGCATGCTTCAATATTTTCTTTCTTTCTATAATAGCACTTCATGTTCAAAGCCGTTTTCTTCCCAATAAATTGATTTCCAATGGAGTTGATGATGTTCAAGCAGAAGAAGATTCATATCTACTTCTTAACAATGATAATGACAAAGGAGTTATTACTGAATCTTCTTCTAATTCAGAGGAGTATTGTAAACAAATGTATGGGTTTTTGCCATGTTCTAATAACATTCTTGGTCATTTATTTCTGATATTGGTTTATGAGTACTTATTGTTCCATGGAGAATCATATTTGGCTGCTGGAGGTGAACAAATATTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCCCTTCCAGAATCCTTAATTCTTCTTGTCACTGGACTTTCAAGTGATAAGGAGAGTGCGCAAGAGTATGCTTCCACTGGAGTTGGATTATTAGCTGGATCATCCATCCTGCTTCTCACAGTTGTGTGGGGGACCTGTGTTATTGTTGGCAAGCAAAGTTTTAAAAATGACTCTCATTCTTCTGATACCTCATATTTATCAACCGGAAGAATAAAACAAGCTTTGACTGGTTATGGCATTACTATGGATATAGACACTAGAAAGATGGCGAGAATCATGGTTTTCTCTGTTATACCACTCCTCATCATGCAGATTCCCACTTTGTTCTATTTCTCTACAACATTACGCAATGTGACCTTGATAGTTTCTCTCATCATTGCTGTCACTTTTCTCATCTCATACTTCATTTACCAGCTCTTTAAACCTCAGATAGAGAAAACAAGACTGGAATACATAAAGCATGATGATTTAATTTTAAGAATTTTCCAACGTGTTGAAAAGCAAACTCTACAAAAGATCCTAACTGAGGATGGAACTCCTAATGTAGCTGCCATAAATGGACTATACCATGAATTCAGTCAACATGGAAAACACTTATCAACTTCTGAAGTAAAAGAGTTGTTGCTTGGGAACAATTTAGCCGACACAAATATCAGAGAGGACCAAATAGCAGACATGTTAAAAGCTTTTGACAAAAATGGCGACCAAATTATAACCAAAGAAGAATTTGTTAGTGGCTTAACAGAATATATTAACCAAACAAAGCATGCTTTGGATAGAAAGTACCTCCCTAAGGAATCTATGAACAAAATGTATCAGAGTTTTATCAAACCATGGATTGAACACGTGAGAAAAGAACGTGAATTGAAGGGACAACTTATTTCCGGAGTCTTAAGTCATGCTCAGAATGATATGGTTGGTAGGATGCTCCATGATGATGGTACAGCTGATAAAGATGCTATCAAAAGGTTATTTGAGCAAGTTGATGGCGATGGCGATAACCATGTTTCAAGATCCGAGTTAGAGAAAGTAGTTAGGGAGACTCATTTTGGTAAGGCTGTAGATGCAGAGGAAGCAGTCTCAAAACTCCTTCACGATCTTGATGCCAACAAAGACAATGAGATTAGTGAGAATGAATTTGTTGATGGCTTCACCAAATGGATAAACTCAAATTCTAGTAAACCAGGAAGCTCAAAATCTTCTTCTCATGAAACTCATCAAACATGGGAAGATGTTGAGAAGGTAATGGAAGAGAATCAAACCAAAGGGGTGACTGCATGGTTAGAAGCTATAGCATACGTGATGTTGGGAATTGCTATGTTGTCACTTCTTGCGGAGCCTCTAATAGCAAGTGTTCAAAAATTCTCTGAAGCTGCAGGAATTTCATCATTTTTCATCTCTTTCATTTTAGTCCCTTTGGCTACAAATTTTAGAGAAGCAACCTCAGCAATCAAAGAAGCTAGCCACAAAAAAAGCAGTAATACTTCTCACACTATGTATGAGATTTATGGTGCAGTGTTCATGAACAACATTCTTGGATTTGTGGTGATATCTATTCTTATATATATGAGGGATATCACTTGGGAATTTTCAGCTGATGTATTAGTGGTGGCAATTGTTTGTGTTGTGATGGGTCTCACCACTAGTTTTCGTTCCACTTTTCCTCTGTGGACATCCTTCCCAACATACCTCTTGTATCTAATATCATTAGTTATGGTTTATGTTCTCAAAGATGTTCTCAATTATGTGTAG 2136 0.3675 MRNITKIACFNIFFLSIIALHVQSRFLPNKLISNGVDDVQAEEDSYLLLNNDNDKGVITESSSNSEEYCKQMYGFLPCSNNILGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIVGKQSFKNDSHSSDTSYLSTGRIKQALTGYGITMDIDTRKMARIMVFSVIPLLIMQIPTLFYFSTTLRNVTLIVSLIIAVTFLISYFIYQLFKPQIEKTRLEYIKHDDLILRIFQRVEKQTLQKILTEDGTPNVAAINGLYHEFSQHGKHLSTSEVKELLLGNNLADTNIREDQIADMLKAFDKNGDQIITKEEFVSGLTEYINQTKHALDRKYLPKESMNKMYQSFIKPWIEHVRKERELKGQLISGVLSHAQNDMVGRMLHDDGTADKDAIKRLFEQVDGDGDNHVSRSELEKVVRETHFGKAVDAEEAVSKLLHDLDANKDNEISENEFVDGFTKWINSNSSKPGSSKSSSHETHQTWEDVEKVMEENQTKGVTAWLEAIAYVMLGIAMLSLLAEPLIASVQKFSEAAGISSFFISFILVPLATNFREATSAIKEASHKKSSNTSHTMYEIYGAVFMNNILGFVVISILIYMRDITWEFSADVLVVAIVCVVMGLTTSFRSTFPLWTSFPTYLLYLISLVMVYVLKDVLNYV* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2576 711 CDD EFh 449 513 IPR002048 GO:0005509
Mtr2g2576 711 SUPERFAMILY EF-hand 320 516 IPR011992 -
Mtr2g2576 711 ProSitePatterns EF-hand calcium-binding domain. 359 371 IPR018247 -
Mtr2g2576 711 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Mtr2g2576 711 Gene3D - 307 386 - -
Mtr2g2576 711 ProSiteProfiles EF-hand calcium-binding domain profile. 346 381 IPR002048 GO:0005509
Mtr2g2576 711 Pfam EF hand 351 371 IPR002048 GO:0005509
Mtr2g2576 711 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Mtr2g2576 711 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 399 525 - -
Mtr2g2576 711 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 10 393 - -
Mtr2g2576 711 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 553 710 - -
Mtr2g2576 711 SMART efh_1 448 476 IPR002048 GO:0005509
Mtr2g2576 711 SMART efh_1 487 515 IPR002048 GO:0005509
Mtr2g2576 711 SMART efh_1 350 378 IPR002048 GO:0005509
Mtr2g2576 711 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 399 525 - -
Mtr2g2576 711 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 10 393 - -
Mtr2g2576 711 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 553 710 - -
Mtr2g2576 711 Pfam EF-hand domain pair 447 510 IPR002048 GO:0005509
Mtr2g2576 711 Gene3D - 387 526 - -
Mtr2g2576 711 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Mtr2g2576 711 Pfam Sodium/calcium exchanger protein 559 702 IPR004837 GO:0016021|GO:0055085
Mtr2g2576 711 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2576 Mtr-Chr2 38702605 38709805 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2576 399 704 EF-hand Containing Proteins AT1G53210 39.264 2.52e-59 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2576 - - gmx:100799062 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2576 2 38702605 38709805 Mtr2g2576 2 38702605 38709805 ECH