Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2570 ATGTCTCTCTCTTTCTCTTACCGACCTCGTTCCCGTTCCCGCCGGAACCACACACCACCGTTCTTCTTTCTCTTCCTCGGTGTGGTAGCAATTCTCTGCAGTCACACCCATGCTCGCTTTTCTACACGCGATCTAATCTCCGATGGTTCCAATGTTCTTCGTCTCCCGACAGAAGCTGATTCCACCTGCGAACAGACCTATGGTTTCTTACCGTGCACCACCACTGTTCTCGGAAACTTGTTCCTTATCTTAGTGTATGGATTTCTTATGTATACTGCTGCGACGTTTTTGTCTAATGGAAGTGAGCTTTTGCTTGAGATCTTAGGTCCTGGCATTGTTGGTGGATTGTTTCTTCCTATCCTTGGTGCTCTTCCTGATGCCATGCTCATTCTTGTGTCTGGGCTTTCAGGAAGTACAGAAGTTGCTCAAAGTCAGGTATCTGTTGGAATGGGACTGCTAGCTGGATCAACAGTGCTGCTTCTGACTATAATATGGGGGACTTGTGTAATTGTAGGCAAGTGTGACATTGAGGATTCAATTGCACTAGATTCAACAGACACTAGGGGATTCCATTTAACTGGTTCTGGTGTTAGTACTGATATTTGGACAAGCTACGCTGCAAGGATTATGATTATATCTGTCATTCCATTTCTGATTGTCCAATTACCACAAATACTCCATTCAAATTCTGGAAGGCACTTGGCTGTTTTGATTGGTTTTGTTGTCTCTGTCTGTTTATTGATCTCTTATTGCCTTTACCAGATTTTCCAGCCCTGGATACAAAGAAGGAAATTGGAATATATTAAACACAAACATGTTATTGTGGGACTTTTGAGACATTTGAAGATGCGTTCATTGGGAAGGCTTCTGAAAGATGATGGCCAACCCGATAAAGAAGTTATTAAAAAGTTGTTTACAACAATTGATGAAAATAAAGATGGACATCTTACTCATGGTGAAATGAGAGCACTGGTTGTTGGAATTCAGTTTGAGGAGATTGACCTTGACCACGATGACGCTGTGACAAAAATAATGGCAGATTTTGATACTTCTCGTAATCAACTTATTGACGAAGGAGAGTTTGTTAATGGAGTCTGTAGATGGCTTCTAGCGACCCAGCGTTCTCGGGTTGCATCTGGTGATGCTGGTCCACACACTGTGAAGTTTTTAAGTGATTTTCACACGGAAACAAAGAGGGAACATGATCTTCTGGATGTGGGGGGTCAGAGTGATGAAGGTGCTGAAGGTGTGGAGAATGCTAGATGGATTTCCATCAAAGCAGGACTGTTCCTTTTACTGGGTTCTCTTATCGCTGCTGCATTTGCCGATCCTTTGGTTGATGTGGTCGATAACTTTTCTGATGCTACAAGTATTCCAGCTTTCTTCATTTCCTTCATTTTTCTACCTCTAGCAACCAATTCAAGTGAAGCAGTATCAGCAATAATTTTTGCTAGTCGTGATAAGAGGCAAACTGCGTCGTTAACATTTTCTGAGATATATGGTGCAGTAACAATGAACAATGTGCTATGTCTATCGGTCTTCTTAGCACTCGTATATGTGAGGGGATTAACATGGGACTTCTCTTCAGAAGTTTTGGTTATTCTCATTGTTTGCATTGTCATGGGCGCCTTTGCCAGTTTCCGCACAGTTTTCCCTCTATGGACATCTATAACGGCTATCCTACTTTATCCTTTCTCCCTGGCATTGGTCTATGTTCTTGATTATCAATTTGGTTGGTCATAG 1743 0.4223 MSLSFSYRPRSRSRRNHTPPFFFLFLGVVAILCSHTHARFSTRDLISDGSNVLRLPTEADSTCEQTYGFLPCTTTVLGNLFLILVYGFLMYTAATFLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSTEVAQSQVSVGMGLLAGSTVLLLTIIWGTCVIVGKCDIEDSIALDSTDTRGFHLTGSGVSTDIWTSYAARIMIISVIPFLIVQLPQILHSNSGRHLAVLIGFVVSVCLLISYCLYQIFQPWIQRRKLEYIKHKHVIVGLLRHLKMRSLGRLLKDDGQPDKEVIKKLFTTIDENKDGHLTHGEMRALVVGIQFEEIDLDHDDAVTKIMADFDTSRNQLIDEGEFVNGVCRWLLATQRSRVASGDAGPHTVKFLSDFHTETKREHDLLDVGGQSDEGAEGVENARWISIKAGLFLLLGSLIAAAFADPLVDVVDNFSDATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILIVCIVMGAFASFRTVFPLWTSITAILLYPFSLALVYVLDYQFGWS* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2570 580 ProSiteProfiles EF-hand calcium-binding domain profile. 296 331 IPR002048 GO:0005509
Mtr2g2570 580 Pfam Sodium/calcium exchanger protein 429 571 IPR004837 GO:0016021|GO:0055085
Mtr2g2570 580 Pfam Sodium/calcium exchanger protein 81 257 IPR004837 GO:0016021|GO:0055085
Mtr2g2570 580 Gene3D - 416 573 IPR044880 -
Mtr2g2570 580 PANTHER SODIUM/CALCIUM EXCHANGER NCL 30 577 - -
Mtr2g2570 580 ProSitePatterns EF-hand calcium-binding domain. 349 361 IPR018247 -
Mtr2g2570 580 ProSitePatterns EF-hand calcium-binding domain. 309 321 IPR018247 -
Mtr2g2570 580 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 30 577 IPR004713 GO:0006812|GO:0008324|GO:0016021
Mtr2g2570 580 Gene3D - 253 378 - -
Mtr2g2570 580 Pfam EF-hand domain pair 298 363 IPR002048 GO:0005509
Mtr2g2570 580 SUPERFAMILY EF-hand 295 371 IPR011992 -
Mtr2g2570 580 SMART efh_1 300 328 IPR002048 GO:0005509
Mtr2g2570 580 SMART efh_1 340 368 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2570 Mtr-Chr2 38634174 38639011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2570 37 580 EF-hand Containing Proteins AT1G53210 66.961 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2570 - - gmx:100809896 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2570 2 38634174 38639011 Mtr2g2570 2 38634174 38639011 ECH