Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2528 ATGTCTATTTTTCTTAACCCCAATACCTCATTTCTCACTTTATTGTTCTTTTCATTTTCCACCTTAATTGCACATGCAATTGTTCCACAAAATGAAACCTTTAAATTTGTAAATTCAGGTGACCTTGGAGACTTCATTGTAGAATATGGAGGTGATTACAGAATGATAAGCATATTCAATGCTCCATTCCAAGTTGGTTTCTACAACACTACTCCAAATGCCTTCACTCTAGCACTTCGAATCGGACTTCAACGATCGGAGCAGCTTTTCCGGTGGGTATGGGAAGCAAATAGAGGCAACCCAGTTGGTGAAAATGGTACTTTTTCATTAGGTGCTGATGGAAATCTTGTGTTGGCTAATGCTGATGGAAGAATTGTTTGGCAAACAAACACTTCCAATAAAGGTGTTGTTGCATTTAGGTTACTCTCAAATGGTAACATGGTTTTAATTGATGCCAAAGATAAATTTGTTTGGCAAAGTTTTGACCATCCAACAGATACCCTTTTGGTAGATCAATATTTAAAACCTAATGGACCTTCAAAGCTTGTTAGTAGACTTTCAGAAAAAGAAAATGTTGATGGCCCTTATAGTTTGGTTTTGGAACCTAAAGGTTTGGCTTTATATTATAGGAGTACAAATTCTCCTAGGCCAAGTAAATATTGGTTTTCTTCTTCTTGGTTTTCATTTGAAAAAGGCTCATTAGAAAATGTCACACTTAAATCTGATCCAGAATCTTTTGAGTTTGGATTTGATTTTCATGTTACCAATTCTACCACTTCTGGCAATAGTATCATTGGTAGGCCAGTGAATAATAGTACCTTAACATATCTTAGGCTTGGAATTGATGGTAACATTCAATTTCACACTTACTTTCTAGATGTACGCAGTGGTGTTTGGAAAGTGACATTCACTCTCTTTGATGAAGATGAAGATCTAGATGAGAGTGAGTGTCAATTGCCAGAGAGATGTGGGGAATTTGGGCTTTGTGAGGATAATCAATGTTTTGGTTGTCCATTGGAGAATGGAATATTTGGTTGGAGTAATAAGTGTAGCCCTAAGCCTTTAGGAGGAGTATGCAAAGCAAGTGAATTTCATTACTACAAAATTGAAGGAGTTGAGCATTACATGAACAAATACACTAGTGGTGATATAGTAAGTGAAGATGCATGTGGAAACAAATGTACCAATGATTGTAAGTGTGTTGGGTATTTCTACCATAAGGATGAATCAAGGTGTTGGATAGCTTATGATCTTCAAACTCTTACTAGAGTTCAAAATACCACACATGTGGGTTATATTAAGGTGCCTAATAAGTAA 1317 0.3614 MSIFLNPNTSFLTLLFFSFSTLIAHAIVPQNETFKFVNSGDLGDFIVEYGGDYRMISIFNAPFQVGFYNTTPNAFTLALRIGLQRSEQLFRWVWEANRGNPVGENGTFSLGADGNLVLANADGRIVWQTNTSNKGVVAFRLLSNGNMVLIDAKDKFVWQSFDHPTDTLLVDQYLKPNGPSKLVSRLSEKENVDGPYSLVLEPKGLALYYRSTNSPRPSKYWFSSSWFSFEKGSLENVTLKSDPESFEFGFDFHVTNSTTSGNSIIGRPVNNSTLTYLRLGIDGNIQFHTYFLDVRSGVWKVTFTLFDEDEDLDESECQLPERCGEFGLCEDNQCFGCPLENGIFGWSNKCSPKPLGGVCKASEFHYYKIEGVEHYMNKYTSGDIVSEDACGNKCTNDCKCVGYFYHKDESRCWIAYDLQTLTRVQNTTHVGYIKVPNK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2528 438 PANTHER - 10 437 - -
Mtr2g2528 438 SMART blect_4 47 164 IPR001480 -
Mtr2g2528 438 ProSiteProfiles Bulb-type lectin domain profile. 31 162 IPR001480 -
Mtr2g2528 438 CDD PAN_AP_plant 362 436 - -
Mtr2g2528 438 Pfam D-mannose binding lectin 93 177 IPR001480 -
Mtr2g2528 438 Gene3D - 42 162 IPR036426 -
Mtr2g2528 438 PIRSF SLG 1 438 IPR035446 -
Mtr2g2528 438 ProSiteProfiles PAN/Apple domain profile. 359 437 IPR003609 -
Mtr2g2528 438 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 10 437 - -
Mtr2g2528 438 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 211 IPR036426 -
Mtr2g2528 438 CDD B_lectin 47 164 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2528 Mtr-Chr2 38081123 38082749 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2528 - - mtr:MTR_2g076490 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2528 2 38081123 38082749 Mtr2g2528 2 38081123 38082749 ECH