Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2525 ATGTCTATTTTTCTTAACCCCAAAACCTCATTTCTCACTTTATTGTTCTTTTCATTTTCCACCTTAATTGCACATGCAATTGTTCCACAAAATGAAACCTTTAAATTTGTAAATTCAGGTGACCTTGGAGACTTCATTGTAGAATATGGAGGTGATTACAGAATGATAAGCATATTCAATGCTCCATTTCAAGTTGGTTTTTATAACACTACCCCAAATGCATTCACTTTAGCTCTTCGAATCGGTCTTCAACGATCGGAGCAGCTTTTCCGGTGGGTATGGGAAGCAAATAGAGGCAATCCAGTTGGTGAAAATGGTACTTTTTCATTAGGTGCTGATGGAAATCTTGTGTTGGCTAATGCTGATGGAAGAATTGTTTGGCAAACAAACACTTCCAATAAAGGTGTTGTTGCCTTTAGGTTACTCTCAAATGGTAACATGGTTTTAATTGATGCCAAAGGTAAATTTGTTTGGCAAAGTTTTGACCATCCAACAGATACCCTTTTGGTTGATCAATATTTAAAACCTAATGGTCCTTCAAAGCTTGTTAGTAGACTTTCAGAAAAAGAAAATGTTGATGGTCCTTATAGTTTGGTTTTGGAGCCTAAAGGTTTGGCTTTATATTATAAGAGTACAAATTCTCCTAGGCCAATTAAATATTGGTTTTCATCTTCTTGGTTTTCATTTGAAAAAGGTTCATTAGAAAATGTCACACTAAAATCTGATCCAGAATCTTTTGAGTATGGATTTGATTTTTTTGTTGCCAATTCTACCACTTCTGGTAGTAGTATCATTGGTAGGCCAGTGAATAATAGTACCTTAACATATCTTAGGCTTGGAATTGATGGTAATATTAAATTTCACACCTACTTCCTTGATGTGCGTAGTGGTGTTTGGAAAGTGACATACACTCTCTTTGATGAAGATGAAGATGAGGGTGAGTGCCAATTGCCTGAGAGATGTGGGAAATTTGGGCTTTGTGAGGATAATCAATGTGTTGGTTGTCCATTGGAGAATGGAATATTTGGTTGGAGTAATAAATGTAATGCTAAGCCTTTAGGAGGAGTATGCAAAGCAAGTGAATTTCATTACTACAAAATTGAAGGAGTTGAGCACTACATGAGCAAATACACTACTGGTGATAGTGTAAGTGAAGATGCATGTGGAAACAAATGTACCAAGGATTGTAAGTGTGTTGGGTATTTCTACCACAAGGATAACTCAAGGTGTTGGAAAGCTTATGATCTTCAAACCCTTACTAAAGTAGAAAATACTACACACGTGGGTTTTATTAAGGTTCCTAATAAGTAG 1311 0.36 MSIFLNPKTSFLTLLFFSFSTLIAHAIVPQNETFKFVNSGDLGDFIVEYGGDYRMISIFNAPFQVGFYNTTPNAFTLALRIGLQRSEQLFRWVWEANRGNPVGENGTFSLGADGNLVLANADGRIVWQTNTSNKGVVAFRLLSNGNMVLIDAKGKFVWQSFDHPTDTLLVDQYLKPNGPSKLVSRLSEKENVDGPYSLVLEPKGLALYYKSTNSPRPIKYWFSSSWFSFEKGSLENVTLKSDPESFEYGFDFFVANSTTSGSSIIGRPVNNSTLTYLRLGIDGNIKFHTYFLDVRSGVWKVTYTLFDEDEDEGECQLPERCGKFGLCEDNQCVGCPLENGIFGWSNKCNAKPLGGVCKASEFHYYKIEGVEHYMSKYTTGDSVSEDACGNKCTKDCKCVGYFYHKDNSRCWKAYDLQTLTKVENTTHVGFIKVPNK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2525 436 Gene3D - 42 162 IPR036426 -
Mtr2g2525 436 ProSiteProfiles Bulb-type lectin domain profile. 31 162 IPR001480 -
Mtr2g2525 436 SMART blect_4 47 164 IPR001480 -
Mtr2g2525 436 PIRSF SLG 1 436 IPR035446 -
Mtr2g2525 436 CDD PAN_AP_plant 360 434 - -
Mtr2g2525 436 PANTHER - 10 435 - -
Mtr2g2525 436 Pfam D-mannose binding lectin 93 177 IPR001480 -
Mtr2g2525 436 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 10 435 - -
Mtr2g2525 436 CDD B_lectin 47 164 IPR001480 -
Mtr2g2525 436 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 226 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2525 Mtr-Chr2 38047994 38049550 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2525 - - mtr:MTR_2g076490 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2525 2 38047994 38049550 Mtr2g2525 2 38047994 38049550 ECH