Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2522 ATGGAAACCATTCCTACTTCCATCAACAGTGGTTTAGGATGGAAATCTTCCCCCTTATTTCAACAATCCAATTGCTTCAACCTTCTTTCTTCTCCATTCAAACCAAAACCCTCTCTCACCAAGTTTACACTCACTTGCTCTGCCGCTTCATCTTCTTCTTCTGATCCTCTCTTGGTTAAGGCTGCGAGAGGAGATCCTGTTAGCCGTCCTCCGGCATGGATGATGCGCCAAGCAGGAAGGTACATGGCTATTTACAGAAAGTTAGCTGAGAAACATCCATCCTTCAGAGAGAGGTCAGAGACGACTGATCTCATTGTAGAAATTTCTTTGCAGCCTTGGAAAGCTTTCAGGCCTGATGGAGTAATTATTTTCTCCGACATCCTAACACCTCTACCTGCGTTTGGGATTGACTTTGACATAGAAGATGTGAGGGGACCTGTAATACAGTCACCGATACGCTCTGAGGAGGGATTAAAGGTTTTGCACCCAATTGACTTCGACAAGCTTAGATTTGTAGGAGAATCACTTAAGATCCTGCAGCAAGAGGTTGGTGGTGATGCCGCTGTTTTAGGTTTTGTGGGAGCACCTTGGACATTGGCAACATATATAGTGGAAGGGGGTACAACGCGCACATATACAAATATTAAGAGCATGTGCCATACAGCACCACACATACTACGGACTCTGCTTTCTCATTTGTCAAAGGCAATAGCAGATTACATCGTTTTCCAAGTGGAATCTGGGGCTCACTGCATACAAATATTTGATTCATGGGGTGGACAACTGCCACCTCATATGTGGGAACTCTGGTCAAAGCCTTATATCAAAGAGATTGTAAATTTGGTCAAGAAAAAGTGCCCAGACACACCACTTGTTCTTTATATAAATGGAAATGGCGGCCTTCTCGAGCGTATGGTAGACACTGGAGTTGATGTTATTGGACTTGACTGGACAGTGGATATGGCTGATGGGAGAAGAAGATTAGGTAGCGGGATAGGTGTGCAAGGAAATGTGGACCCTGCTTCCTTATTCTCTCCTCTTACTTCCCTAACAGAAGAAATTCAGAGGGTTGTGAGGTCTGCAGGACCTAGACAACACATCCTTAATCTTGGGCATGGTGTTCTTGTTGGCACACCTGAAGAAGCTGTAGCACATTTCTTTGACGTCGCGAGGAGCTTGAAGTTTGACACAGTCTCTCAAAACAACACTGCAAATGTAGCTTAA 1224 0.4461 METIPTSINSGLGWKSSPLFQQSNCFNLLSSPFKPKPSLTKFTLTCSAASSSSSDPLLVKAARGDPVSRPPAWMMRQAGRYMAIYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGIDFDIEDVRGPVIQSPIRSEEGLKVLHPIDFDKLRFVGESLKILQQEVGGDAAVLGFVGAPWTLATYIVEGGTTRTYTNIKSMCHTAPHILRTLLSHLSKAIADYIVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVNLVKKKCPDTPLVLYINGNGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLTSLTEEIQRVVRSAGPRQHILNLGHGVLVGTPEEAVAHFFDVARSLKFDTVSQNNTANVA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2522 407 Hamap Uroporphyrinogen decarboxylase [hemE]. 54 394 IPR006361 GO:0004853|GO:0006779
Mtr2g2522 407 TIGRFAM hemE: uroporphyrinogen decarboxylase 58 391 IPR006361 GO:0004853|GO:0006779
Mtr2g2522 407 CDD URO-D 60 392 IPR006361 GO:0004853|GO:0006779
Mtr2g2522 407 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 36 404 - -
Mtr2g2522 407 Gene3D - 46 395 IPR038071 -
Mtr2g2522 407 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 190 206 IPR000257 GO:0004853|GO:0006779
Mtr2g2522 407 Pfam Uroporphyrinogen decarboxylase (URO-D) 57 392 IPR000257 GO:0004853|GO:0006779
Mtr2g2522 407 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 71 80 IPR000257 GO:0004853|GO:0006779
Mtr2g2522 407 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 36 404 - -
Mtr2g2522 407 SUPERFAMILY UROD/MetE-like 57 394 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2522 Mtr-Chr2 37998827 38004931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2522 K01599 - gmx:100807032 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2522 2 37998827 38004931 Mtr2g2522 2 37998827 38004931 ECH