Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2078 ATGGCAGAAGACAGCAACGAGAAGGAAATTCAAATCCGAACCCTGACCGGTGAATCCATCACTCTTCACATCACTCGCTCTTCCACCGTCCAACAACTCAAACTTCTCCTCAACCACTCTTTCCCTCCCGCCACCAACTCCCCCAATTTCCATCTCTTCTTCAAGGGAAATAAATTGCAATTGCATGATCAAATTGGTTCTTATCAAATTGAAAGCGGGGACTTTGTTGTTTTGATTCCATTTGTCAAGAAGGAACCAACTCAAAAAGAGAAACCGGATTCGGTTTTCTCTTCTCCAAATGTTGCTTGCAATGCTTCAACCTCCAGTTTCGCCGATACAACGTGGTCGAATATTATGGAAGATTTGTCGGAATTACGCGAAACCACTGAAGAAATTGATGTTATTAAAAAGAAAACTGTAGAGGGTGAAATGAAAAGGGGTTTAGGTTCTGAGAAGGAGATAAATCTTCCTTATCATATGATATTGAATACATTGGATCATACTAGTAGGAGTGCTGAGGTTTTTCCAAAGGTATTGGAATCGGTGAATTGTTTATCTGATTTGCCTCTTGGATACTGCAAGTTGTTGAAGAGAACATGTTTGAAGGGAAATGGTGGTGGCAGTGTTACTTGCTTGTGTCCGCCTTGGTTGAAGATGGTTCTGAAGTCGTTTGCTTTCATAAACATTTTTTCCGCGTTTCTTCATTTGCAAAGTAGGAAGGTAACAACGAGTCTACTGGATGAAGCACTTGACCAGCTGGCGAAGTTTGGTGTTAAACTTGGCGCCCATGACATGAAGCGTCTTTCCCTTCTTTGTCCTCATCTTGTATGTTTTGTAGATGACATAGAGAAGGCAAGTTTTGGTGATGTCATTGTCGTAGTAAATAATTCAACTACCAATGACGATCGAATTGAAGATAATCCTAAAAGAGCTCGCAAGTCGCTGTATATTTCAAAGATTGTCAGTACATTGGAGAGAAGGGACAATTCTTTCCGAAAATATCTGGGGTTGGCTTTTGAGCAGCTTCAGTTTGAAATTGGAGATGAGATGAACGTGAGAATTTCGTTCGAAACACTGCTTGCAACAGTGAAGGACCTTGATTTTACCAGAAAAGGAAGCAAATCTAAACGTGTAAAGAGAAGCTCAACTTCCTCAGGATCTAAGATGGACCGCATTGGGTGTCATGACACAGAGTCATTAATGGCTGTCGACATGGTTGATCATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAAAAGCCATTTACAGTGACATCCCAGCTGAACTATCAGAGAAAACGAGATCTACACTAAAGTATATTGGAGTTTCCAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCCCTTCTCGGGAAGAATGTTGTTGTGGCTACAATGACATCTAGCGGAAAATCTCTTTGCTACAACCTGCCCGTTTTAGAAGAGTTGTTTAAGAATTCATCGTCATGTGCTTTGTACATATTTCCTACAAAGGCGTTAGCTCAAGATCAACTAAGATCTTTGTTACACATGACGAAAGAATTTGATGTTGACTTAAATATCGGTATATATGATGGTGACACTTCTCATAGTGAAAGGGCACGGCTGCGTGATAATTCTAGACTGTTAATCACAAATCCAGATATGTTACACATAACAATCTTGCCCCACCATCGGCTATTTCGCCGGATTTTATCAAATCTAAGGTTTCTGGTAATTGATGAAACTCATACCTACAAGGGAGCATTTGGAAGTCATACTGCTCTTATATTAAGGAGGCTTAAGCGACTCTGCTCACATGTATATGGAGCTGTGCCTTCTTTTTTGTTCTCTACTGCAACTTCTGCAAATCCTCATGAGCATTCTATGGAACTTGCAAATTTATCCACAGTGGAGTTATTTCAGAAAGACGGAAGTCCCTCTGCAAGAAAACTCTTCATCCTTTGGAATCCTGTTTTGCGCCCAAAAGCTACATTCATTAAAGCTCACTTGGCTATGGATAACAATGAATTAGCAGATGAAAGTGCCAATTTTGTTCGTTCAAGCCCAATCGTGGATGTTTCACGCCTTCTTGCAGAAATGGTTCAGCATGGTCTTCGCTGCATTGCATTTTGTAAATCAAGGAAACTTTGCGAGCTTGTTTTATCCTATACACGTGAAATTCTTCATGAGACAGCCCCTCATCTACTGGATTCCGTATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTGCATTTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGACGTCACTCTGCATCTAGGATTTCCTGGTAGTATTGCTAGCTTGTGGCAGCAAGCTGGTAGGGGTGGGAGGAGAGATAGATCATCTCTTGCGATATATGTTGCCTTTGGTGGACCACTTGATCAATACTTCATGAAAAATCCTAGGAAACTTTTTGATAGACCAATTGAATGCTGTCATATTGATTCCCAAAACAAACAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTCATGAACACCCTCTGAGTGTGCAGTATGATGAGCAGTATTTTGGTGCTTGCTTAGAGAGTGTTTTGAATTCTCTAAAAGATAGAGGATACTTATGTTCTGATCTGTCCGATTCTCCTAGAATTTGGAACTACATTGGTCCTCAGAAATTACCTTCACAAGCAGTCAATATTCGAGCAATAGAAACTGTTAGATACAGTGTCATAGATCAGAAAAAAGAACAAGTCCTAGAAGAGATAGAGGAAAGCAAGGCTTTCTTTCAGGTATACGATGGTGCAGTGTACCTGCGTCAGGGGAAAACGTATTTGGTTGAAAAATTAGATCTATCTAGCAAAACTGCTTTCTGCAAAGAGGCTGATCTGAAGTATTATACGAAAACTCGAGATTACACTGATATCCACGTCATTGGGGGTAATATTGCTTATCCAGTAATTGATTCCACCATGTTTCCAAACACAAATGTCCGTGCTAATGTATGCCAAGTGACAACTACTTGGTTTGGATTTTATCGTATTTGGAGAGGAAGCAATCAAATCATCGATGCTGTTGATCTAGCACTTCCTCCATATTCATACCAGTCACAGGCAGTCTGGGTTCCTGTGCCACCGTCAATAAAAGAAGCAGTTGTAAAAAAAAATTATGATTTTCGTGGAGGTTTGCATGCTGCTTCTCATGCTGTTTTACACGTAGTGCCTTTACATATAATGTGCAACTTGTCTGATTTGGCTCCCGAGTGTCCAAATCCTCATGACAGCCGATATTATCCTGAAAGAATCTTAATATATGATCAATGTCCTGGAGGGTCTGGAATTTCAGTACAGGCTCAACCTCATTTCACAAAGTTCCTGGCAGCTGCTCTGGAAGTGCTCACATGTTGCCGCTGTTCGGCTGAAGTAGGTTGCCCTAATTGTGTTCAGAGCTTTGCTTGCCATGAGTATAATGAGGTTTTGCACAAGGATGCGGCCATTATGATCATCAAGGGTATTCTAGATACAGAGAACTAG 3591 0.408 MAEDSNEKEIQIRTLTGESITLHITRSSTVQQLKLLLNHSFPPATNSPNFHLFFKGNKLQLHDQIGSYQIESGDFVVLIPFVKKEPTQKEKPDSVFSSPNVACNASTSSFADTTWSNIMEDLSELRETTEEIDVIKKKTVEGEMKRGLGSEKEINLPYHMILNTLDHTSRSAEVFPKVLESVNCLSDLPLGYCKLLKRTCLKGNGGGSVTCLCPPWLKMVLKSFAFINIFSAFLHLQSRKVTTSLLDEALDQLAKFGVKLGAHDMKRLSLLCPHLVCFVDDIEKASFGDVIVVVNNSTTNDDRIEDNPKRARKSLYISKIVSTLERRDNSFRKYLGLAFEQLQFEIGDEMNVRISFETLLATVKDLDFTRKGSKSKRVKRSSTSSGSKMDRIGCHDTESLMAVDMVDHLKKGIGSEGQIVHIEDICARKAIYSDIPAELSEKTRSTLKYIGVSKLYSHQAESIQASLLGKNVVVATMTSSGKSLCYNLPVLEELFKNSSSCALYIFPTKALAQDQLRSLLHMTKEFDVDLNIGIYDGDTSHSERARLRDNSRLLITNPDMLHITILPHHRLFRRILSNLRFLVIDETHTYKGAFGSHTALILRRLKRLCSHVYGAVPSFLFSTATSANPHEHSMELANLSTVELFQKDGSPSARKLFILWNPVLRPKATFIKAHLAMDNNELADESANFVRSSPIVDVSRLLAEMVQHGLRCIAFCKSRKLCELVLSYTREILHETAPHLLDSVCAYRGGYIAEERRKIESAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRSSLAIYVAFGGPLDQYFMKNPRKLFDRPIECCHIDSQNKQVLEQHLVCAAHEHPLSVQYDEQYFGACLESVLNSLKDRGYLCSDLSDSPRIWNYIGPQKLPSQAVNIRAIETVRYSVIDQKKEQVLEEIEESKAFFQVYDGAVYLRQGKTYLVEKLDLSSKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVIDSTMFPNTNVRANVCQVTTTWFGFYRIWRGSNQIIDAVDLALPPYSYQSQAVWVPVPPSIKEAVVKKNYDFRGGLHAASHAVLHVVPLHIMCNLSDLAPECPNPHDSRYYPERILIYDQCPGGSGISVQAQPHFTKFLAAALEVLTCCRCSAEVGCPNCVQSFACHEYNEVLHKDAAIMIIKGILDTEN* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2078 1196 Pfam DEAD/DEAH box helicase 457 626 IPR011545 GO:0003676|GO:0005524
Mtr2g2078 1196 CDD Ubl_ubiquitin_like 10 79 - -
Mtr2g2078 1196 Gene3D - 688 870 IPR027417 -
Mtr2g2078 1196 ProSiteProfiles Ubiquitin domain profile. 8 79 IPR000626 GO:0005515
Mtr2g2078 1196 Pfam MrfA Zn-binding domain 1085 1167 IPR018973 -
Mtr2g2078 1196 Pfam Helicase conserved C-terminal domain 701 810 IPR001650 -
Mtr2g2078 1196 CDD DEXHc_Hrq1-like 455 636 - -
Mtr2g2078 1196 CDD SF2_C_Hrq 657 821 - -
Mtr2g2078 1196 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 463 644 IPR014001 -
Mtr2g2078 1196 Gene3D - 429 646 IPR027417 -
Mtr2g2078 1196 SMART helicmild6 731 812 IPR001650 -
Mtr2g2078 1196 Gene3D - 9 96 - -
Mtr2g2078 1196 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 697 855 IPR001650 -
Mtr2g2078 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 830 IPR027417 -
Mtr2g2078 1196 SMART ultradead3 451 657 IPR014001 -
Mtr2g2078 1196 Pfam Ubiquitin family 10 78 IPR000626 GO:0005515
Mtr2g2078 1196 SUPERFAMILY Ubiquitin-like 5 79 IPR029071 -
Mtr2g2078 1196 PANTHER ATP-DEPENDENT HELICASE HRQ1 22 1195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2078 - - cam:101511069 2001.48