Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2060 ATGAAGGTCCGATTAATGAAAATGAGGGAGGCCCACACCCAAAAAGGCGGCCGTGCTTCCTTCTGCTCACTCGTATGGGACCAGAAAGCCGAACATCTCGTCACCGCTTCCTCTTCCGATGTCTCCGTCTCGATTCATAACCCTCTTCTTCCTTCTACCGCTCCTAAGATTCTCCGTCACCACCGTGATGGTGTTACTGCTTTGGCTCTTAGCCCTAATTCCACTTGTCTTGCTTCTGGATCTGTGGATCACTCCGTTAAACTCTACAAATTTCCAGGTGGAGAGTTCGAGACAAATATTACAAGGTTTACACTTCCGATACGTTCCTTAGCATTTAACAAGAAAGGAAGCATGTTAGCAGCTGCAGGTGATGATGAGGGCATCAAGCTCATAAACACAGTCGATGGCTCTATTGCGAGGGTTCTGAAGGGGCACAAAGGACCAGTTACTGGCTTAGCTTTCGACCCTAATGGTGAATACTTGGCATCTCTGGATTCAATTGGAACCGTTATCATCTGGGAACTCCACTCAGGGAAAAACCTTCACAACCTTAAGGGCATAGCTCCTGACACTGGGTTAGATCTTTTAACCATGAATGTTCTTTGCTGGAGTCCGGATGGTGAGACCTTAGCCATTCCCGGGTTGAAAAATGATGTCGTGATGTATGATAGGGACACTGCTGAGAAGTTGTTCACTCTTAGAGGAGATCATACTCAGCCTATATGTTTTTTGTGTTGGTCACCCAATGGCAAGTACATGGCCACCTCTAGTTTAGATAAGCAGATTCTGATATGGGATGTTGATAAGAAGCAGGATATTGACAGACAGAAGTTCGATGAAAGAGTGTGTTGCATGACTTGGAAGCCGATCGGGAATGCCTTGGCTGTTATTGATGTTATGGGAAAGTACGGTATATGGGACAATGTTATTCCTTCATCTATGAAGTCTCCAACCGAGGATATACCTATGTTGGGCAAGAACAGTAATGGGCTTCTTTTGTTTGACGAGGAGGAAGAGGACAATAGTGTTAGTGGGAGCTTGAGTGATCTTGGTGAAAATAGTAACGGTGAGTTTGAGCCACCAACTAGCAGGAAAAGATTGCGCAAACATTCCTTTAGCGAGGAAAATTTGGATGAGGATGGAGAAGAATATGGAATTGATCTATTTCCAAAGGTTGAGTCTCACAAGAAAAGAAACCGGTCAGTCAAAGAAAATTTGAATAATGGCAGTGTGGGATTTAGAAGCACAATGGTAACATCTAAGACAAAAATGCAGGAGGCATTTCAATCAGGAGCCACTCCAGTACAGCCTGGAAAAAGGCGCTTCTTATGCTATAATATGCTTGGAAGTATAACCACTGTCGATCACGATGGATACTCTCATATTGAGATTGATTTTCATGATACTGGAAGCAGTCCTCGAGTTCCATCAATGACTGACCATTTTGGATTTACAATGGCTGCACTGAATGAAAATGGAAGTGTCTTTGCAAATCCTTGCAAGGGGGAGAAGAACATGAGCACCCTCATGTATCGCCCATTTAGCAGCTGGGCTAGCAATAGCGAGTGGTCTATGCGCTTTGAAGGCGAAGAAGTAAAGGTTGTTGCACTTGGGGCTTCTTGGGTGGCTGCAGTGACAAGTTTTAACTATCTTCGCATCTTTACTGAAGGTGGTATGCAGAGACATGTAATTTCGCTAGATGGGCCACCGGTGACTGCATCAGGTTTCAAGGATAAGCTTGTAGTTGTTACTCATGCTTCTGATTGTCTTTCCTCAAATGAGCAGGTGTTAGAGTTTAGTTTATTTAATATAGCACAGGGGACCCAACCCCTTCGAGGCCGCTTGCCGATAACTCCTGGTTCTTCTTTAAGTTGGTTTGGGTTTAGTGAAGAGGGCCAATTGTGTTCGTACGATTCCAAGGGTGTGCTAAGATTATATACAAGTCAATTTGGTGGAAGCTGGTTCCCAGTCTTCAGTGCTATTAAAGAGAAGAAAACAGATGAAAACTATTGGATGGTGGGTTTGAATACAAACAAGTTAGTTTGTGTAGTATTGAAAAAGCCTGAATCCTTCCCACAGGTGGTGCCTAAACCAATTCTCACTTTAATGAATCTTTCATTTCCACTTGCTACATCTGATTTGGGAGCTGAGGCCCTTGAAAATGAGTTTATGATGAACAGCATGCATCTCTTTGAGGTTCAGAAAAAGATGGAAGAAATGGATAATGCTGGTTTGGATGCTAGTTTACTTGATGACGATGCTTTCAATTTGGAAGCAGCACAAGATAGATGCATACTAAGGCTAATAGCATCATGCTGCAATAGTGATAAACTTGTGAGAGCTACTGAACTTGTCAAGCTTTTGTCACTGGAGAAATCAATGAAAGGTGCAATAAAACTTGTTACTGCTCTGAAACTTCCAAATTTGGCTGAAAAATTCAACGACATATTGGAGGAAAGGCTATACAATGAAGTTAAAAAGACTACGGAAACCAACCTCAAGGAAAACAGTTCTGCACCTGTTACATCAGATACTCTACCTACCAGTAGCAAGGCCGAAACATCGAAAGCATCTATTATTTCATCATCACCAAACTTATCTGCACCATCCTTCATAAAGAAAAATAAAACACAAGAGGCAGCTATAGATGGAATGAATAAACCTGCAATTGTTAACGGAAGTATGAAGACAGGAGGAGATGAAACAAGTGACAAGAAAGGTAAGGAGGCAATGCAGGCTCCTCCTCATCCACTTGGTTCCTCGGTAAAGCCGACAAATAAGCCTGGAGTTGACAAATCAGAGCCTAGTTTGGTGACACCAACCAGACCGTCCAATCCATTTTTGAAGTCCTCAATGAAATGA 2862 0.4284 MKVRLMKMREAHTQKGGRASFCSLVWDQKAEHLVTASSSDVSVSIHNPLLPSTAPKILRHHRDGVTALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGSMLAAAGDDEGIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASLDSIGTVIIWELHSGKNLHNLKGIAPDTGLDLLTMNVLCWSPDGETLAIPGLKNDVVMYDRDTAEKLFTLRGDHTQPICFLCWSPNGKYMATSSLDKQILIWDVDKKQDIDRQKFDERVCCMTWKPIGNALAVIDVMGKYGIWDNVIPSSMKSPTEDIPMLGKNSNGLLLFDEEEEDNSVSGSLSDLGENSNGEFEPPTSRKRLRKHSFSEENLDEDGEEYGIDLFPKVESHKKRNRSVKENLNNGSVGFRSTMVTSKTKMQEAFQSGATPVQPGKRRFLCYNMLGSITTVDHDGYSHIEIDFHDTGSSPRVPSMTDHFGFTMAALNENGSVFANPCKGEKNMSTLMYRPFSSWASNSEWSMRFEGEEVKVVALGASWVAAVTSFNYLRIFTEGGMQRHVISLDGPPVTASGFKDKLVVVTHASDCLSSNEQVLEFSLFNIAQGTQPLRGRLPITPGSSLSWFGFSEEGQLCSYDSKGVLRLYTSQFGGSWFPVFSAIKEKKTDENYWMVGLNTNKLVCVVLKKPESFPQVVPKPILTLMNLSFPLATSDLGAEALENEFMMNSMHLFEVQKKMEEMDNAGLDASLLDDDAFNLEAAQDRCILRLIASCCNSDKLVRATELVKLLSLEKSMKGAIKLVTALKLPNLAEKFNDILEERLYNEVKKTTETNLKENSSAPVTSDTLPTSSKAETSKASIISSSPNLSAPSFIKKNKTQEAAIDGMNKPAIVNGSMKTGGDETSDKKGKEAMQAPPHPLGSSVKPTNKPGVDKSEPSLVTPTRPSNPFLKSSMK* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2060 953 MobiDBLite consensus disorder prediction 359 376 - -
Mtr2g2060 953 MobiDBLite consensus disorder prediction 832 870 - -
Mtr2g2060 953 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 58 90 - -
Mtr2g2060 953 ProSiteProfiles Trp-Asp (WD) repeats profile. 142 183 IPR001680 GO:0005515
Mtr2g2060 953 Pfam WD domain, G-beta repeat 57 89 IPR001680 GO:0005515
Mtr2g2060 953 Pfam WD domain, G-beta repeat 140 163 IPR001680 GO:0005515
Mtr2g2060 953 MobiDBLite consensus disorder prediction 937 953 - -
Mtr2g2060 953 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1 906 - -
Mtr2g2060 953 MobiDBLite consensus disorder prediction 342 376 - -
Mtr2g2060 953 CDD WD40 10 310 - -
Mtr2g2060 953 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 234 268 - -
Mtr2g2060 953 Gene3D - 195 321 IPR015943 GO:0005515
Mtr2g2060 953 SMART WD40_4 269 307 IPR001680 GO:0005515
Mtr2g2060 953 SMART WD40_4 51 90 IPR001680 GO:0005515
Mtr2g2060 953 SMART WD40_4 7 47 IPR001680 GO:0005515
Mtr2g2060 953 SMART WD40_4 226 266 IPR001680 GO:0005515
Mtr2g2060 953 SMART WD40_4 135 174 IPR001680 GO:0005515
Mtr2g2060 953 SMART WD40_4 93 132 IPR001680 GO:0005515
Mtr2g2060 953 MobiDBLite consensus disorder prediction 344 358 - -
Mtr2g2060 953 SUPERFAMILY WD40 repeat-like 10 307 IPR036322 GO:0005515
Mtr2g2060 953 ProSitePatterns Trp-Asp (WD) repeats signature. 253 267 IPR019775 -
Mtr2g2060 953 ProSiteProfiles Trp-Asp (WD) repeats profile. 58 99 IPR001680 GO:0005515
Mtr2g2060 953 ProSiteProfiles Trp-Asp (WD) repeats profile. 234 275 IPR001680 GO:0005515
Mtr2g2060 953 Gene3D - 2 194 IPR015943 GO:0005515
Mtr2g2060 953 MobiDBLite consensus disorder prediction 882 953 - -
Mtr2g2060 953 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 142 179 - -
Mtr2g2060 953 Pfam Anaphase-promoting complex subunit 4 WD40 domain 201 288 IPR024977 -
Mtr2g2060 953 Pfam Minichromosome loss protein, Mcl1, middle region 427 709 IPR022100 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2060 61 294 Miscellaneous Gene Families AT5G08390 27.119 3.52e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2060 K11274 - gmx:100809300 1452.96