Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1980 ATGGTTGCAACTGCTGCAACATCTTCGTTTTTTCCTGTTACATCATCATCTTCATCCGATAGTGTTGGAAAATCTTCCAAACATGGAGTTAGTTCTGCTAACCTTGGAGGATACAAATCCAAGCAAAGCTCTAATGGATTAAACATTAAAGCAAATGCAGCACCTTCCAAAATCAACGGAACTGCGGTTACAACTGCGCCGGTGAAGGTTGAAAATGATTCACCATCACAACATCACCCAAGGACATTCATCAATCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTGTTACCACAATTTTCCTTGCTGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAGACGACCTGATATGCTTGTTGACCCTTTTGGTATAGGGAAAATTGTTCAAGATGGTCTTGTGTTTCGCCAAAACTTTTCGATTAGATCGTACGAAATAGGTGCGGATAAAACTGCGTCTATAGAGACGTTAATGAATCATTTGCAGGAAACTGCACTTAATCATGTTAAGACTGCCGGGCTTCTTGGTGATGGCTTTGGTTCTACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTTGTTACTCGGATGCAGGTTGTGGTTGATCGTTATCCGACGTGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCGGCAGGAAAAAATGGTATGCGTCGTGATTGGCTTGTGCGCGACGCCAAAACAGGGGAAATCTTGACAAGAGCATCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAAACTATCTAAAATTCCAGAAGAGGTCAGAGGAGAGATAGAGCATTATTTTGTTAATTCTGATCCAGTTGTGGACGAGGATAACAGAAAATTAACTAAACTTGATGATTCGGCTGAATATATTCGCACTGGTTTAAGTCCCAGATGGAATGATCTAGATGTTAATCAGCATGTTAATAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCAATTTTGGAGAGTCATGAGCTGCATTCCATGACTTTGGAGTACAGGAGGGAATGTGGCAGGAACAGTGTACTTCAGTCCCTGACATCTGTCTCTGGTGCTGACATTGGAAATTTAGCTGACAGCGGGTTTGTTGAATGCAAGCACTTGCTTCGACTCGATGATGGTGCCGAGATTGTTAGGGGTAGGACTGGGTGGAGGCCAAAACCTATCAACAATTTTGATGTTCTGAATCAGTTTCCATCACAGAGCACCTAA 1248 0.4311 MVATAATSSFFPVTSSSSSDSVGKSSKHGVSSANLGGYKSKQSSNGLNIKANAAPSKINGTAVTTAPVKVENDSPSQHHPRTFINQLPDWSMLLAAVTTIFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSAAGKNGMRRDWLVRDAKTGEILTRASSVWVMMNKLTRKLSKIPEEVRGEIEHYFVNSDPVVDEDNRKLTKLDDSAEYIRTGLSPRWNDLDVNQHVNNVKYIGWILESAPQPILESHELHSMTLEYRRECGRNSVLQSLTSVSGADIGNLADSGFVECKHLLRLDDGAEIVRGRTGWRPKPINNFDVLNQFPSQST* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1980 415 CDD 4HBT 137 253 - -
Mtr2g1980 415 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 401 IPR045023 GO:0006633|GO:0016297
Mtr2g1980 415 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 282 IPR029069 -
Mtr2g1980 415 Gene3D Hotdog Thioesterase 127 403 - -
Mtr2g1980 415 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 296 402 IPR029069 -
Mtr2g1980 415 MobiDBLite consensus disorder prediction 1 37 - -
Mtr2g1980 415 Pfam Acyl-ACP thioesterase 134 397 IPR002864 GO:0006633|GO:0016790
Mtr2g1980 415 Pfam Acyl-ATP thioesterase 1 123 IPR021113 GO:0016790
Mtr2g1980 415 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1980 Mtr-Chr2 27891035 27894748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1980 1 399 Acyl Lipid Metabolism Gene Families AT1G08510 76.543 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1980 K10781 - gmx:100170693 657.521