Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1977 ATGGCGCAAGAAAATGCATCAAATTGCATATACCTAGCAACATTCCTCATCATCTTCCTAACCATAATCTCATCTTCCTCTGCTTGGGTTGGTGTAAACTGGGGAACAATGACAACCCACCAACTTCCACCTAAGAAAGTTGTGAAGATGCTTAAGGACAACGGGTTTCGAAAATTGAAACTTTTTGATGCTGATGATACCATTTTGACAGCTCTAATGGGTACTGATATCGAAGTTATGGTTGCGATTCCGAATGTCATGTTGAGCAAGATTAGTAACAGTCCTATGGATGCTGATTCTTGGGTTTATGAGAATGTTACTGCTTACTTGTTCAGAGGTGGTGTCAATATCAAGTATGTTGCTGTGGGTAATGAGCCTTTCCTCAAAGCATACAATGGTAGCTATCTAAATAAGACCCTTCCAGCTCTCAAGAATATACAGACTTCACTCAACAATGCAGGGTTGGAATCAAAGGTCAAAGTAACTGTTCCATTTAATGCTGACATTTACTATTCACCAGACTCAAATCCAGTGCCATCTGCAGGTGACTTCAGACCTGAATTAAGAGACATCACTATTGAAATAGTCCAGTTTCTATATTCAACCAACTCAACTTTTACGGTTAATATCTACCCTTTCCTTAGCCTTTACTATGGACAAGATAATTTCCCGTTTGATTTTGCATTTTTTGATGGAAAGAATGAACCACTTCGAGACGGAAAAGCAGTTTACAACAATGTGTTTGATGCAAATCTGGATACCCTTATGTGGGCTTTAGAAAAAGCAGGTTATCCTGACTTGCATGTTACAGTTGGTGAAGTTGGGTGGCCAACAGATGGTGATAAGAATGCTAATGCCAAAAATGCAAAGAGGTTCAACCAAGGTTTCATTAAACATGCTCTGAGAGGTAATGGTACACCAAAGAGAAAAGGCATGATGGATTTTTATCTATTCAGTCTCATTGATGAGAATGATAAAAGTGTTGCTCCAGGCAACTTTGAGAGGCATTGGGGGATTTATGAGTTTGATGGAAAACCAAAGTATGAATTAGACATAAGAGGAAATCATAAGGAAAAGGGTCTTGTTTCTGTTGAAGGGATAAAGTACCTAGAAAAAAAATGGTGTGTTTTGGATCCAGAAGCTACTGATTTGGATGATTTGGGTAAAAATGTTGACTATGCTTGTAGCCATTCTGATTGTACAGCACTTGGATATGGCTGTAGTTGTAGTAATCTAAATGTTCAAGGGAATGCTTCATATGCTTTCAATATGTATTATCAAGTTAATGACCAGATGGATTGGGACTGTGATTTCTCTGGTTTGGCTATGGTTACACATGAGGATCCTTCAGAGAATGGCTGCAATTTCCCTTTGATGGTCGCTAGTGGTTCGCGTGCAGGGCTTTCCAAGATCCTGATGAAAGCAATGGAGGTATATTTTTTTGCTATGCTTTTGCTATAA 1461 0.3888 MAQENASNCIYLATFLIIFLTIISSSSAWVGVNWGTMTTHQLPPKKVVKMLKDNGFRKLKLFDADDTILTALMGTDIEVMVAIPNVMLSKISNSPMDADSWVYENVTAYLFRGGVNIKYVAVGNEPFLKAYNGSYLNKTLPALKNIQTSLNNAGLESKVKVTVPFNADIYYSPDSNPVPSAGDFRPELRDITIEIVQFLYSTNSTFTVNIYPFLSLYYGQDNFPFDFAFFDGKNEPLRDGKAVYNNVFDANLDTLMWALEKAGYPDLHVTVGEVGWPTDGDKNANAKNAKRFNQGFIKHALRGNGTPKRKGMMDFYLFSLIDENDKSVAPGNFERHWGIYEFDGKPKYELDIRGNHKEKGLVSVEGIKYLEKKWCVLDPEATDLDDLGKNVDYACSHSDCTALGYGCSCSNLNVQGNASYAFNMYYQVNDQMDWDCDFSGLAMVTHEDPSENGCNFPLMVASGSRAGLSKILMKAMEVYFFAMLLL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1977 486 Gene3D - 369 461 - -
Mtr2g1977 486 Pfam X8 domain 373 443 IPR012946 -
Mtr2g1977 486 SUPERFAMILY (Trans)glycosidases 30 351 IPR017853 -
Mtr2g1977 486 Pfam Glycosyl hydrolases family 17 30 351 IPR000490 GO:0004553|GO:0005975
Mtr2g1977 486 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 465 IPR044965 GO:0004553|GO:0005975
Mtr2g1977 486 Gene3D Glycosidases 29 360 - -
Mtr2g1977 486 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 9 465 - -
Mtr2g1977 486 SMART X8_cls 373 456 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1977 Mtr-Chr2 27618391 27621268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1977 30 460 Miscellaneous Gene Families AT2G19440 56.845 8.22e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1977 - - gmx:100781894 766.918