Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1874 ATGGCGAAATTGAAGATAGCAGGAACATGGTCAGGTGTATTAGAAGAAGTTGATTTAGAGAATTGGACAATTTCTTCATTACGTGAAGAAGTTGCGAAGCGATCCAATTGCGATAACCCTCACTTCATTAACCTTATTTGTGCTGGTAGAATTCTCAAAGATGATGATAAAACCCTAACCCTAACCCAATTAGGTATCAAAAATAACTCCAAGATTCTCGCTACTGTTACTTCTCCTCAACAGAGTCAGTCTCTTGTTGTTGAGGAACAAAGCTCTCATAGGCTTGCTCGTATTAGGGCAGCTGCAACTGCATTGGCTGAAAGGCATGCTGATGGTTCATTACCTCTTGAAGACTTTAACATAGAAGTTGAAGATCAAAGTGGACAGAAAGTACGTTTAGGAACAGAGATTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCGTTTTATCAGAAAGGGAAATTACAAAGATGCACTTGAAGTGCTTACCATGGGAGAGGAGTCATTCTCTATTTGTGATCCAAAAGTTATTGAGCTTATTGACAATGTTCCGATACTGCAAATTGACATGGTATGGTGCTACTTCATGCTACGGGACATTAGATGGTTATCAGATGCTGGAAAGCGCCTTGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTCTCCGCCTCAGACTCTTACAAGGTGGTCGCTATCCAGAGCTTGCACTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATTTCATTCTGGCCAGTTGGAGAAATCAAGGCAAGCATTAGCCTCTGCAAAAGCGAAGTTTGTTCAGCTGCAAGTGCCAGATGAGGCCTTATCACTTGTTATGAGTATGGGCTACACTCAAAGGGATGCAAAGAGAGCACTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGTTGAGGAGAAGGCAAAGAAAATGCAAAAAGACGAGGAAGATTTAAAAAGAAGAGATGAAATTAGGGAGCAAAAGCAGTATGGGGTGACCCCCTTAAAGAAGGCCGTGGATCTGGAGAGACTGAACGAATTGGTCACTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACGAATCCAGAAACTAATTCTCATTTACAGGTTAAGATCGAGTCAAGGAAAAGGAAAAGACAGCAACAAGCAAAAGATTCTGCAATTGAGAAAGTTGTGCAAATGGGTTTTGAAAGATCGAGAGTGGTCGCTGCTTTTGAAGAAGGCGGCAATTTAGAAGAAGTATTGCAAAGACTGACAGCACAACCTCAAGTTAATTCAACTGCTGCTTTTGATGGTATTGGAAGTTCATCTAACCCTTTACCAGAAAATGTTGGTTCTGATATTCCAGACCAAATGAATGAGGTTGAGGATCAAAATAAAACAGAAGAAAGAGATGTGGAGATGGAAGATGAGCTTTCTGCAGATATAGCTAAAGGAGATGCCTTTACTGATTATGACATTGAAGTTAATATTGAAGGGGAAGCCATAACTGAGTACTTGTCTATGGTTGAGTCTGCAGGTATTGCTTCCAAATAA 1635 0.4165 MAKLKIAGTWSGVLEEVDLENWTISSLREEVAKRSNCDNPHFINLICAGRILKDDDKTLTLTQLGIKNNSKILATVTSPQQSQSLVVEEQSSHRLARIRAAATALAERHADGSLPLEDFNIEVEDQSGQKVRLGTEIDQRAVMMGLMLHAKGKRFIRKGNYKDALEVLTMGEESFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQGGRYPELALHLRLELLEGVVAFHSGQLEKSRQALASAKAKFVQLQVPDEALSLVMSMGYTQRDAKRALRMNNQDVGGAIDFLVEEKAKKMQKDEEDLKRRDEIREQKQYGVTPLKKAVDLERLNELVTIGFEKELAAEALRRNENDTQKALDDLTNPETNSHLQVKIESRKRKRQQQAKDSAIEKVVQMGFERSRVVAAFEEGGNLEEVLQRLTAQPQVNSTAAFDGIGSSSNPLPENVGSDIPDQMNEVEDQNKTEERDVEMEDELSADIAKGDAFTDYDIEVNIEGEAITEYLSMVESAGIASK* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1874 544 MobiDBLite consensus disorder prediction 402 418 - -
Mtr2g1874 544 SUPERFAMILY UBA-like 346 394 IPR009060 GO:0005515
Mtr2g1874 544 Gene3D - 261 338 - -
Mtr2g1874 544 Gene3D - 14 85 - -
Mtr2g1874 544 SMART uba_6 285 322 IPR015940 -
Mtr2g1874 544 SMART uba_6 417 453 IPR015940 -
Mtr2g1874 544 SMART uba_6 357 394 IPR015940 -
Mtr2g1874 544 CDD UBA 361 390 - -
Mtr2g1874 544 MobiDBLite consensus disorder prediction 387 419 - -
Mtr2g1874 544 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 355 395 IPR015940 -
Mtr2g1874 544 Coils Coil 485 505 - -
Mtr2g1874 544 MobiDBLite consensus disorder prediction 486 510 - -
Mtr2g1874 544 MobiDBLite consensus disorder prediction 461 477 - -
Mtr2g1874 544 SUPERFAMILY Ubiquitin-like 20 76 IPR029071 -
Mtr2g1874 544 SUPERFAMILY UBA-like 277 324 IPR009060 GO:0005515
Mtr2g1874 544 Gene3D - 358 395 - -
Mtr2g1874 544 ProSiteProfiles Ubiquitin domain profile. 23 81 IPR000626 GO:0005515
Mtr2g1874 544 MobiDBLite consensus disorder prediction 461 510 - -
Mtr2g1874 544 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 539 IPR039749 -
Mtr2g1874 544 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 283 323 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1874 - - gmx:100792972 808.905