Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1833 ATGGTCTACCTTAACATTCTCAAAATCACGAACATTAAACCTTTTCAAACAACAAGGTTTTTCAACACAACCTCTTCTATATTAAATCTCTGCACAAAACCACAATACCTTCAACAAATCCATGCTAGATTCTTCCTCCATGGTCTCCATCAAAACTCTTCTCTTTCCTCCAAACTCATTGATTCTTATTCCAACTTTGGACTCCTTCATTTTTCACACAAAATCTTCTCTTTTACTGAAAACCCTGATTCAATTATCTACAATGCATTCCTTAGAAATTTGTTTATGTTTGGTGAATATGAAAAAACCCTTTTTTTGTATAAAGAAATGGTTCAGAAATCTATGTGCCCTGATGAAGATTGTTGCTTTTCTGTTTTGAAATCTTTGTTTTATGTGTTTCATGAAAAAGGGTTGATAATGATGGCTCATGGGCATGTGGTGAAATTGGGTATGGATGCATTTGATTTGGTGGGAAACACTTTGATTGAATTGTATGGTTTTTTGAATGGGAATGGATTGGTTGAAAGAAAATCTGTAACAAAGTTGAATTTTTGGAATAATTTGATTTATGAGGCTTATGAAAGTGGGAAAATTGTGGAAAGTTTTGAATTGTTTTGTAGGATGAGAAATGAGAATGTACAACCTAATTCAGTTACTCTGATTAATTTGTTAAGGGCTACTGTTGAATCAAACTCGTTGAAGATTGGGAAAGTTCTTCATTCTTTGGTTGTTGCGAGTAATTTGTGTAAGGAACTAACTGTGAATACTGCATTGTTGTCAATGTATGCTAAGTTGGATAGTTTAAAAGATGCAAGGTTGATGTTTGAGAAAATGCCTGAGAAGGATGTTGTAGTTTGGAATATAATGATTTCAGTGTATTCTGGGAGTGGTTGCCCTAAGGAATCGTTAGAACTTGTGTATTGTATGGTTAGGTCGGGGATTAGACCTGATATGTTCACGGCAATCCCCGCTATTTCATCGATCACGAAGTTAAAGTCTATCGAGTGGGGGAAGCAATTGCATGCTCAAGTGATAAGAAACGGTTCAGATTATCAGGTTTCGGTTCATAATTCTCTCGTCGACATGTATTCCACGTGTGCAGACTTGAATTCGGCTCGGAAGATTTTCGGTTTGATAAAGGACAGGACGGTGGTTTCATGGAGTGCAATGATAAAAGGGTATGCAATGCATGACAATTGTCTCGAGGCTCTTTCTCTGTTCATAGAAATGAAGTTAAGTGGTACTAAAGTTGATCTTGTAATAGTCATTAACATATTGCCTGCGTTTGCAAAGATAGGGGCATTGCATTATGTAGGATACTTACATGGATACTCATTGAAAACCAATCTCGATTCACTCAAATCACTTAAGACATCACTTCTTAATAGCTATGCGAAATGTGGTTGTATAGAGATGGCAAGAAAGCTTTTCAATGAAGAGAAAAGCAGCCTTAAAGATATAGTTGCATGGAACTCTATGATCACTGCATATTCTAACCATGGGGAATGGTTTCAATGTTTTGAGTTGTACAACCAAATAAAACTATCAATTGTTAAACCAGATCATGTAACATTTCTCGGGATGCTAACAGCTTGTGTTAATTCAGGCCTTGTGGACAAAGGCAAGGAAATTTTCAAGGAGATGGTGGACATTTATGGTTTCCAACCTAGTAAGGAACACAATGCATGTATGGTTGATCTATTAGGACGCGCAGGAAAAATCGATGAAGCAAGAAAAATAATAGAAACTAATCAATTAAATTCAGATGCGAGGGTTTATGGCCCCTTGTTGAGTGCATGTAAGATGCATGGTTTAGAAACCGATTTCGCAGAACTTGCTGCTGAGAAGCTCATAAAAATGGAACCTGAAAATCCTGCAAACTATGTGTTGCTATCCAATATATTTGCTGCAGCAGGAAAATGGGACAAATTTGCTAAAATGAGGAGTTTTCTTAGAGATAGAGGACTAAAGAAAACACCAGGTTGTAGCTGGGTAGTGTTGGATGGACAATTTCATGAGTTTCGTGTTGCAGATCATTCTCATCCAAGATCAGAAGACATATATTCAGTTTTGAAAGTACTAGAGTTGGAAGCTGGCATGGAGGATGATGATCTTGAATTCTTTTTTGACCCGTCTACTATTTTGGCGATGTGA 2154 0.3677 MVYLNILKITNIKPFQTTRFFNTTSSILNLCTKPQYLQQIHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDAFDLVGNTLIELYGFLNGNGLVERKSVTKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLKVLELEAGMEDDDLEFFFDPSTILAM* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1833 717 Pfam PPR repeat 458 479 IPR002885 -
Mtr2g1833 717 Pfam PPR repeat 385 414 IPR002885 -
Mtr2g1833 717 Pfam PPR repeat 256 282 IPR002885 -
Mtr2g1833 717 Pfam PPR repeat 284 314 IPR002885 -
Mtr2g1833 717 Pfam PPR repeat 86 113 IPR002885 -
Mtr2g1833 717 Pfam PPR repeat 185 213 IPR002885 -
Mtr2g1833 717 TIGRFAM PPR: pentatricopeptide repeat domain 284 317 IPR002885 -
Mtr2g1833 717 TIGRFAM PPR: pentatricopeptide repeat domain 523 550 IPR002885 -
Mtr2g1833 717 TIGRFAM PPR: pentatricopeptide repeat domain 385 418 IPR002885 -
Mtr2g1833 717 TIGRFAM PPR: pentatricopeptide repeat domain 488 521 IPR002885 -
Mtr2g1833 717 TIGRFAM PPR: pentatricopeptide repeat domain 86 119 IPR002885 -
Mtr2g1833 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 486 520 IPR002885 -
Mtr2g1833 717 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 5 706 - -
Mtr2g1833 717 Pfam E motif 607 665 IPR046848 -
Mtr2g1833 717 Gene3D Tetratricopeptide repeat domain 171 256 IPR011990 GO:0005515
Mtr2g1833 717 Gene3D Tetratricopeptide repeat domain 11 149 IPR011990 GO:0005515
Mtr2g1833 717 Gene3D Tetratricopeptide repeat domain 454 681 IPR011990 GO:0005515
Mtr2g1833 717 Gene3D Tetratricopeptide repeat domain 320 447 IPR011990 GO:0005515
Mtr2g1833 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 83 117 IPR002885 -
Mtr2g1833 717 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 5 706 - -
Mtr2g1833 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 417 IPR002885 -
Mtr2g1833 717 Pfam PPR repeat family 485 533 IPR002885 -
Mtr2g1833 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1833 Mtr-Chr2 21687487 21694541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1833 4 697 Glycoside Hydrolase AT3G49170 28.011 2.54e-90 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1833 - - gmx:102669772 1060.83