Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1818 ATGGAAGATAAGGGTATGGATCAAAATGAAGATGAATGTCGCAATGAAGGTGAAACTAACAACAAACAAGATGATGAGGAAGCTGTTGCTCACCTCGAAGAAATCAAGAAATCGATCGAGGCAAAAATGGCTTTACGTCAAACCAATTTGAATCCCGAGAGGCCTGACACAGGATTTTTTAGGACCTTGGATTCCAGCATTAAACGCAACACTGCAGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCAGCGTGAATCACTGATGGACGACTTGCGAAGTGTCAACTTAAGCAAATTTGTTAGTGAAGCAGTGGCAGCTATATGTGAGGCAAAACTTAGGAGTTCTGATATACAAGCAGCAGTTCAGATATGCTCTTTGCTTCATCAAAGGTACAAGGATTTTGTGCCAACTCTGATTCAAGGACTTCTCAAAGTCTTCTCTCCTGGAAAATCTGGTGATGAAACAGATTCAGACAAAAACTTAAAGGCAATGAAGAAGCGCAGCTCTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGGGTTATTGAAGATGGTGGTATTTTTATCAGTATCATAAAAGATCTTACCAGTGTGGAACAGCTGAAAGACCGGGAAGCTACGCAAACAAGTTTGACCCTTCTTTCTAGCTTTGCTCGGCAAGGAAGAATTTTTCTAGGACTTTCTGTTACTGGGCCAGAAATTCATGAAGAGTTTATGAAAGGCCTCAACATCACGGCAGATCAAAAGAAAGTTATCAGGAAAGCATGTTATTCGTTTTATGATACTGCAGCAGAACTACTTCAGTCTGAGCATTCTTCACTTCGATTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGAGAGCTAAGCGAAGAAAATCTCTCTTCATATGAAAAACTTCGTAAATCCTATGACCATTTGTACCGTAATGTCTCATCATTAGCTGAAGCACTTGATATGCAGCCTCCTGTAATGCCAGAGGATGGCCACACAACAAGGGTTACTAGTGGTGAGGAAGCTGTTTCTTCTGCTGCTGGGAAAGATTCTTCTGTTGTTGAACCTATATGGGACGATGAAGACACCAGAGCTTTTTATGAATGTTTACCTGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAGCCAAAAGTTAATGAGCAATCTGTGAAGGGTCAAGACCAATCAACCGAAATATTACCTGAATCAGACAAAAGTCAACTGGTCACCCTTGATAGTGGAGAGGTCTCCACAGAATCTAGCGTTTTACCTGAGGGAGAAAGCTCAGAGATAGTGAATGATAAAGAAGAAAAAGAAAAGTCTAAAGAGTTGGACAGAGACAAGGAAAAAGAAAAAGAAAAAGAAGGTGAAAAAAAGGGGGAACATGAAAAAGAAAAACTCAGAAGTCTTGAAGGAACAAATTTGGATGCTCTATTGCAGAGGCTTCCGGGTTGTGTGAGCCGGGACCTTATAGATCAATTAACAGTAGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTTGTGAGGGCTTTGTTCAGTGTACCAAGGACTTCTCTAGAACTGCTAGCGTATTACTCACGCATGGTTGCCACACTCTCAACTTGTATGAAGGATGTCTCCTCCCTTCTATTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGACCAGATGAATATTGAGACAAAGATCAGGAATATCAGGTTTATTGGAGAACTTTGCAAGTTCAAAATTGCCCCTGCTGGCCTGGTCTTCAGTTGTTTGAAGGCCTGTTTAGATGATTTTAGTCATCACAACATTGATGTAGCTTGCAACCTTCTTGAAACATGTGGCCGTTTTCTGTATCGGTCTCCAGAAACTAGTATACGTATGGGTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTTAAAAACTTGGATCCTAGACATAGCACTTTGGTGGAGAATGCATACTACCTTTGCAAGCCACCTGAAAGATCTGCACGAGTAGCTAAAGTCCGTCCTCCGTTGCATCAGTATATCAGAAAGTTACTTTTCTCTGATCTTGACAAGACGACCATTGAGCATGTGCTGAGGCAACTTCGTAAATTACCATGGAGTGATTGTGAACTGTATCTTTTAAAATGCTTCATGAAGGTTCACAAAGGAAAGTATGGTCAGATCCACCTGGTTGCATCTCTTGCTGCTGGGTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTTTTGGAGGAGATTAGAATTGGGTTGGAACTAAATGACTATGGGATGCAACAAAGACGCGTTGCCAACATGCGATTTTTAGGAGAGCTTTACAACTACAAGCATGCTGACTCATCTGTTATTTTTGAGACATTGTATCTCATTATTGTCTTTGGCCATGGAACACCTGAGCAAGATGTACTCGATCCACCTGAAGATTTTTTCCGTATAAGGTTGATCATTACTCTACTTGAAACTTGTGGCCATTACTTTGATCACGGCTCTTCTAAGAAAAAGCTTGATCGGTTCCTGATGCACTTCCAACGGTATATTTTAAGCAAAGGTGCACTGCCTCTGGATGTTGAATTTGACTTGCAGGATCTGTTTGCGGACTTGCGTCCCAGTATGGTTCGTTACACTTCTGTTGATGAGGTGAATGCAGCTCTAGTGGAACTTGAGGAGCACGACCGAATAGTTTCTACTGATAAGGCTAGTAGTGAAAAACATTCTCACACTGATAAGCCCTTAAGTAGGAGCACTTCCACCACGATGGTCAGCAATGGACAAAACAATGATAACGGCATTGAGGAAAATGGAGTGCAAGACAATGTCAACGAAGGTGAGCATGATTCAGGGAGTGACGTAATCGATGCAGAAGGACATGATGATGAAGAGTTGGATGAGGAGAATCATGATGATGGGGGTGAGACTGAGGATGACGATGAGGATGAGGACGGACCTGCTTCTGATGATGAAGATGAAGTCCATGTGAGACAGAAGGTGACAGAAGTCGACCCATTAGAAGAAGCTGATTTTGATCAGGAGCTCAAGGCTGTCGTACAGGAAAGTATGGAACAGCGACGACTGGAGCTACGGGGCCGTCCTACATTGAACATGATGATTCCAATGAATGTATTTGAAGGATCAGCCAAGGATCATCATGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAAGCCTTAGACGAGGATACTGGCGTAAGCAAGGAGGTTCAGGTGAAAGTTCTGGTGAAGCGTGGTAATAAACAACAAACGAAGCAGATGTACATCCCCAGTGATTCCTCACTGGTGCAGAGTACGAAACAGAAAGAAGCGGCTGAGCTTCAGGAGAAAGAAGACATTAAGAGGCTTATCTTGGAGTATAATGATAGAGAAGAGGAAGAGCTTAATGGATTGGGGGCCCAACCTTCGAACTGGATGCAAAGTGGAGGTAACAGGGTTGGTGGTCGTGGCAACTCTTTTGAAGGAACCAGTGGCAGGGGTGGTGGATCACGGCATCGGCATCATCACTACTATACTGGCGGTGGGATCTACTATAGCAGAAGAAGGTGA 3600 0.4225 MEDKGMDQNEDECRNEGETNNKQDDEEAVAHLEEIKKSIEAKMALRQTNLNPERPDTGFFRTLDSSIKRNTAVIKKLKQINEEQRESLMDDLRSVNLSKFVSEAVAAICEAKLRSSDIQAAVQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDETDSDKNLKAMKKRSSLKLLLELFFVGVIEDGGIFISIIKDLTSVEQLKDREATQTSLTLLSSFARQGRIFLGLSVTGPEIHEEFMKGLNITADQKKVIRKACYSFYDTAAELLQSEHSSLRLMEHENSKILNAKGELSEENLSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVKGQDQSTEILPESDKSQLVTLDSGEVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEKEKEKEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLAYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETSIRMGNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKTTIEHVLRQLRKLPWSDCELYLLKCFMKVHKGKYGQIHLVASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVANMRFLGELYNYKHADSSVIFETLYLIIVFGHGTPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKKKLDRFLMHFQRYILSKGALPLDVEFDLQDLFADLRPSMVRYTSVDEVNAALVELEEHDRIVSTDKASSEKHSHTDKPLSRSTSTTMVSNGQNNDNGIEENGVQDNVNEGEHDSGSDVIDAEGHDDEELDEENHDDGGETEDDDEDEDGPASDDEDEVHVRQKVTEVDPLEEADFDQELKAVVQESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDEDTGVSKEVQVKVLVKRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQPSNWMQSGGNRVGGRGNSFEGTSGRGGGSRHRHHHYYTGGGIYYSRRR* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 926 950 - -
Mtr2g1818 1199 SMART if4_15 481 669 IPR003890 GO:0003723|GO:0005515
Mtr2g1818 1199 SMART if4_15 684 885 IPR003890 GO:0003723|GO:0005515
Mtr2g1818 1199 SMART if4_15 67 289 IPR003890 GO:0003723|GO:0005515
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 1166 1199 - -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 434 472 - -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 910 925 - -
Mtr2g1818 1199 PANTHER - 6 1197 - -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 910 1007 - -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 967 1000 - -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 1059 1080 - -
Mtr2g1818 1199 Gene3D - 1090 1114 - -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 389 472 - -
Mtr2g1818 1199 SUPERFAMILY ARM repeat 679 904 IPR016024 -
Mtr2g1818 1199 Gene3D - 680 909 - -
Mtr2g1818 1199 Coils Coil 22 42 - -
Mtr2g1818 1199 Pfam MIF4G domain 686 880 IPR003890 GO:0003723|GO:0005515
Mtr2g1818 1199 Pfam MIF4G domain 484 668 IPR003890 GO:0003723|GO:0005515
Mtr2g1818 1199 Coils Coil 552 572 - -
Mtr2g1818 1199 Gene3D - 19 329 - -
Mtr2g1818 1199 SUPERFAMILY ARM repeat 83 204 IPR016024 -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 391 432 - -
Mtr2g1818 1199 Gene3D - 446 679 - -
Mtr2g1818 1199 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 6 1197 IPR039762 GO:0000184
Mtr2g1818 1199 Coils Coil 437 459 - -
Mtr2g1818 1199 SUPERFAMILY ARM repeat 478 672 IPR016024 -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 952 966 - -
Mtr2g1818 1199 Pfam Up-frameshift suppressor 2 1001 1136 IPR007193 -
Mtr2g1818 1199 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1818 K14327 - gmx:100786092 1911.73