Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1811 ATGGCTTGTGTGAAATTGGGTTCTAAAGCTGATGCATTTCAACGTCAGGGTCAAGCCTGGTTCTGTACGACTGGGCTTCCCAGCGATATAGTTGTTGAAGTTGGTGAGATGTCTTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGCGGAGTTTTGGAAAGATCAATTGCCAAAGCTTCTGAATCAGAGGAAGAATGCGCCATACACCTTCACGACATTCCTGGTGGGGCCAAAACATTTGAACTCGTTGCAAAATTCTGCTACGGCGTGAAACTCGAACTTACGGCATCAAATGTTGTGTGCCTATGGTGTGCTGCCGAGCATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCCCAAGCTGAAACCTTTTTCAATCAAGTGGTCCTCCGAAGTTGGAAAGACTCAATGAGGGCACTTCAAACCTGTGACGATGTTCTAGACCAAGCTGAAGAGCTTCACATTGTGAAGAGGTGCATTGAATCGCTTGCAGCAAAGGCATCCACTGACCCAAATTTATTTGGGTGGCCGGTATTGGAGCGTGGTGGTCCCTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATTAGTACTGGGGCAAGACCAAAGAATACAAGTTTAGATTGGTGGTATGAGGATGTAGCAAATTTGAGTTTACCGATTTATAAGAGGTTGATAGCTGTCATGGAATCTCGAGGCATTAGGCAGGAAATCATTGCCGGTTCTCTTGCTTTCTATGCTAAAACATATTTGCCTGGTTTAAATCGACGTAAGGTTTCCGGTGAGTCCAGTACCCGACTTACCCAGGCGGCTTTGCTATCTCCCCCATCTGAAGAAGATCAAAAAATTCTTCTGGAAGAGATTGATCAACTACTCCCAATGCAGAAGGGCCTGGTCCAAACGAAGTTCCTGTTTGGTCTACTTCGAACGGCCATGATTCTACGGGTGAACCCCTCTTGCATATCAAGTTTGGAGAAACGGATCGGGATGCAGCTTGATCAAGCTGCTTTGGAAGATCTCTTGATGCCAAATTTCTCGTATTCAATGGAGACACTTTACAATGTCGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGATTACAGGTGGTGCATCTCCATGCTCAATTGATGAAGATGGCCAGTTGATCGGATCACCTTCACTGACACCCATTACCATGGTGGCAAAACTGATTGATGGTTACCTGGCCGAGGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCAAGCCCTTGCTGCGGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATACCGTGCTATAGATATTTATTTGAAGTCTCACCCATGGTTGGTGGAGTCAGAGAGAGAGCAACTATGCAGGCTAATGGACTGCCAGAAGCTCTCATTAGAAGCATGCACCCACGCCGCACAGAACGAAAGGCTCCCCATTAGAATCATAGTTCAAGTTCTATTTTTCGAGCAACTCCAGCTTCGGACTTCAATAGCTGGTTGTTTTCTAGTATCAGACAATCTTGACGGATCAAGAAATTTAAGAAGTGGTTTGGTCGGATCAAACGAGGGTGGTTGGGCATCGGCAGTCAAGGAAAATCAGGTATTGAAAGTAGGGATGGATAACATGAGGATGAGAGTATCTGAGCTCGAGAAAGAGTGCTCAAACATGAGACAAGAGATTGAGAAACTTGGTGGTAAGGCAAAAGGATCATCAACAAGCGCTTGGGGAGTTGTTTCGAAGAAACTCGGGTTTAAGATAAAGTCTCAAATGTGTAGTGCTCAAGAAGGATCTGTTAGCAAACAGAACAATGGACATCATAATGTTGAGAAGTTGAAGGACAGAAATGTAAAGCATAATAGAAGTTCTTCTATTAGTGACAAAGGATCAGTCTCTTCAATTATTCCTTCTTAG 1944 0.4439 MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERSIAKASESEEECAIHLHDIPGGAKTFELVAKFCYGVKLELTASNVVCLWCAAEHLEMTEEYGEGNLISQAETFFNQVVLRSWKDSMRALQTCDDVLDQAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNTSLDWWYEDVANLSLPIYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRKVSGESSTRLTQAALLSPPSEEDQKILLEEIDQLLPMQKGLVQTKFLFGLLRTAMILRVNPSCISSLEKRIGMQLDQAALEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQITGGASPCSIDEDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRNLRSGLVGSNEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGGKAKGSSTSAWGVVSKKLGFKIKSQMCSAQEGSVSKQNNGHHNVEKLKDRNVKHNRSSSISDKGSVSSIIPS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1811 647 CDD BTB_POZ_NPY3-like 19 122 - -
Mtr2g1811 647 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Mtr2g1811 647 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Mtr2g1811 647 ProSiteProfiles NPH3 domain profile. 213 503 IPR027356 -
Mtr2g1811 647 MobiDBLite consensus disorder prediction 616 632 - -
Mtr2g1811 647 Coils Coil 543 577 - -
Mtr2g1811 647 MobiDBLite consensus disorder prediction 633 647 - -
Mtr2g1811 647 PANTHER - 1 621 - -
Mtr2g1811 647 MobiDBLite consensus disorder prediction 606 647 - -
Mtr2g1811 647 Gene3D Potassium Channel Kv1.1; Chain A 14 116 IPR011333 -
Mtr2g1811 647 Pfam NPH3 family 213 479 IPR027356 -
Mtr2g1811 647 PANTHER OS12G0117600 PROTEIN 1 621 IPR043454 -
Mtr2g1811 647 SUPERFAMILY POZ domain 16 114 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1811 Mtr-Chr2 21267674 21274215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1811 8 573 EF-hand Containing Proteins AT3G44820 48.805 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1811 - - gmx:100794676 1152.12