Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1809 ATGGAGGAAGAAGAAAGCGAGAAGAGAACAGTGAGAATATTCGTCGGAGGAATAGGCGAAGCGGTAACCTCCGATGACATTCGAAGACTGTTCGAATCATTAGGTAGCGTTCAATCACTCGAAACCATTCGTACCAAAGGTCGCAGTCTCGCTTACCTTGATTTCCTTGCTGATTCTAAATCCCTTTCCAAGCTTTTCAGTAAGTATAATGGGTGTGTTTGGAAAGGTGGAAAGCTGAAACTTGAAAAGGCTAAAGAGCATTACCTTGATCGTTTGAAAAAAGAATGGGAAGAAGATGCAATTCTTAGTATCGAACCACCAGCTTCTGATGTTTCTACTCATAAGGAGGATTTGGTAAAGGAAAAGCCTAATGCAAGGCGCATTGTAGATCCAGATGCAAAGCCTCTCAATATTTACTTCCCAAGATTAAGAACGGTTAAATCCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTCCAGAATATTAAAGTTGGTCCTCTCCCTGTACATTTCTGTGATTGTGAGGAACATTGCAGTCCTTTTATCACAAAAAAGGAAAAGTTATCTATGAATGGGGAAACTGAAAGGGAAAAGTCAGAAATTGGTGGAATAAATGATGAAGAAATTAACATAATGAATGCTGTGATGAACAAGCTTCTTGAAAAAGAAAAGGTTTCTAACACCAAGCATCTTGGAAAGAAGCACGATTCTTTTGAATCTCTCAGTGTTATTCATTCTAATGAATGTGAAGTAGATAGTGCAACAGATGATGGTGATGATGATGATGATGATCTCATAACCAACATTGCAACAAAGAAAAATAAAGCAGCTTTGACAGGGACCGAAGAACTTGAAAGGATCATGGAAAGTCAGGAATGGTCCAATAAAACAAATATTGCAGAGGAAGAACCCGTTGAAGCGCAAAAAAGGAGCAAGAGCAATTCCAACAAGGTTAAGAAGAGAAAATCACTTTCCAAATCAGAAAGTGAAAGCAATGGGGTTGCGTCTAGTACCCCTGTAGGCAAGAGTAAAATGCAGACCCTTCTAGATGAGGTGGGATCTGGTGCAAAGCCTACTGAACCAGAATATGATTTTGGGGAGTCTGCCAAAGTTTCATGGTCTCAGAAGTCTTCGTGGAGAGAACTTGTTGGTAAAGGAGGCAATGCTTCATTCAGTGCCTCTCTAATATCGCCGAAGTTTGATTCTGCTGATGATCAGCAAAACTCTGATGGTTCTTACACTTCCTCGTCTACAAACGATGAAACTGAAGACATGGAAAGCGATGAATACCCAGAGAGCGAACCTACCAATACAAAAGTGATAGAAGAGCCTTCCAAATCTCAACCTACCGATACACAAGTGATCGAAGAACATGGTGAAGCTCAAGCTACCAATACAAGAGTTATAGAAGAGCCTGCTGAATCTCTGCCTACCAATGCACAAGTGATAGAAGAACCTGCTGAAGCTCAACCTACCAATAAACAAGTGATAACTGAACCTGCTGAAACTCAGCATAACATAGCACCAAAAATAACCGGCACAGGTGTTTCGTGGTGGCAAAAGAAATCATGGACACAGTTGGCTAATGAGAATAACAGTCCATTCAGCCTTTCACAACTTTTGCCTGACATTAGTTTCCCAGAACAAACGGCCAAAGAACCCATTTTGTACCCTGCCGGTTCCAGTGAGTGCAAGCATAATGGTGCTGATAAGAATACTGTTGATGGAACTGTCACTGATGGCTTCAACTTAGGGGAGATTGTACCAGGGAATAGTGAGCATGCTGGTACCGATGATATAGTTTCTGCTCCAGTAGTTGAGAAAATCGTTGAAACAAGTCCAAGGGAACGATCTGCAAATGTTGAAATAGGAGAAACTTGCTCATTTATGAGAAGTGCCGATTCTTTGAAAGAGTGGAAAAAAGCTAAAGCCGCCGTTAGTGGATCGCTCAAAAGAAAACGCAGTGAGAAGAAGTAA 1983 0.411 MEEEESEKRTVRIFVGGIGEAVTSDDIRRLFESLGSVQSLETIRTKGRSLAYLDFLADSKSLSKLFSKYNGCVWKGGKLKLEKAKEHYLDRLKKEWEEDAILSIEPPASDVSTHKEDLVKEKPNARRIVDPDAKPLNIYFPRLRTVKSIPFSGTGKHKYSFQNIKVGPLPVHFCDCEEHCSPFITKKEKLSMNGETEREKSEIGGINDEEINIMNAVMNKLLEKEKVSNTKHLGKKHDSFESLSVIHSNECEVDSATDDGDDDDDDLITNIATKKNKAALTGTEELERIMESQEWSNKTNIAEEEPVEAQKRSKSNSNKVKKRKSLSKSESESNGVASSTPVGKSKMQTLLDEVGSGAKPTEPEYDFGESAKVSWSQKSSWRELVGKGGNASFSASLISPKFDSADDQQNSDGSYTSSSTNDETEDMESDEYPESEPTNTKVIEEPSKSQPTDTQVIEEHGEAQATNTRVIEEPAESLPTNAQVIEEPAEAQPTNKQVITEPAETQHNIAPKITGTGVSWWQKKSWTQLANENNSPFSLSQLLPDISFPEQTAKEPILYPAGSSECKHNGADKNTVDGTVTDGFNLGEIVPGNSEHAGTDDIVSAPVVEKIVETSPRERSANVEIGETCSFMRSADSLKEWKKAKAAVSGSLKRKRSEKK* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1809 660 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 55 IPR000504 GO:0003723
Mtr2g1809 660 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 86 IPR000504 GO:0003723
Mtr2g1809 660 SMART rrm1_1 12 82 IPR000504 GO:0003723
Mtr2g1809 660 CDD RRM_NOL8 12 85 IPR034138 -
Mtr2g1809 660 MobiDBLite consensus disorder prediction 440 462 - -
Mtr2g1809 660 Gene3D - 1 89 IPR012677 -
Mtr2g1809 660 MobiDBLite consensus disorder prediction 291 471 - -
Mtr2g1809 660 PANTHER TRANSCRIPTIONAL REGULATOR 1 659 - -
Mtr2g1809 660 MobiDBLite consensus disorder prediction 392 422 - -
Mtr2g1809 660 MobiDBLite consensus disorder prediction 330 346 - -
Mtr2g1809 660 SUPERFAMILY RNA-binding domain, RBD 7 85 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1809 - - mtr:MTR_2g048340 1243.8